RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 HNRNPCL2B2RXH8 293 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 HNRNPCL1O60812 293 aaKnown RBP17.06■□□□□ 0.32
HMGA2-210ENST00000541363 DCUN1D2Q6PH85 259 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-210ENST00000541363 GSTA1P08263 222 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 GSTA2P09210 222 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 HSP90AA5PQ58FG0 334 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 CCDC124Q96CT7 223 aaKnown RBP17.06■□□□□ 0.32
HMGA2-210ENST00000541363 EFCC1Q9HA90 598 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 SCHIP1Q9P0W5 487 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-210ENST00000541363 PFDN6O15212 129 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 TTC4O95801 387 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 PAK2Q13177 524 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 DRC3Q9H069 523 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 STK24Q9Y6E0 443 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 ESYT2A0FGR8 921 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 KRT12Q99456 494 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 NUP58Q9BVL2 599 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 CCDC169A6NNP5 214 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 SSH1Q8WYL5 1049 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 GOLGA8QA0A0J9YX86 632 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 GOLGA8OA6NCC3 632 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-210ENST00000541363 GOLGA8NF8WBI6 632 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 SP4Q02446 784 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 TRIM31Q9BZY9 425 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 HIP1RO75146 1068 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 AP1ARQ63HQ0 302 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 MGARPQ8TDB4 240 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-210ENST00000541363 F13A1P00488 732 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 RAP1GDS1P52306 607 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 MMEL1Q495T6 779 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 LRCH2Q5VUJ6 765 aa17.05■□□□□ 0.32
HMGA2-210ENST00000541363 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-210ENST00000541363 PLCG2P16885 1265 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 TACO1Q9BSH4 297 aaKnown RBP17.04■□□□□ 0.32
HMGA2-210ENST00000541363 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 BRDTQ58F21 947 aaPredicted RBP17.04■□□□□ 0.32
HMGA2-210ENST00000541363 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 USTQ9Y2C2 406 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
HMGA2-210ENST00000541363 RSAD2Q8WXG1 361 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 PALM2Q8IXS6 379 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 SERPINB6P35237 376 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 RARSP54136 660 aaKnown RBP17.04■□□□□ 0.32
HMGA2-210ENST00000541363 DNM1Q05193 864 aaKnown RBP17.04■□□□□ 0.32
HMGA2-210ENST00000541363 HS1BP3Q53T59 392 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 FAM8A1Q9UBU6 413 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 ELP1O95163 1332 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 SCYL1Q96KG9 808 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 IL1RL1Q01638 556 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 NLRP7Q8WX94 980 aa17.04■□□□□ 0.32
HMGA2-210ENST00000541363 OATP04181 439 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 STX2P32856 288 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 VPS41P49754 854 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 ANKRD20A4Q4UJ75 823 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 ANKRD20A2Q5SQ80 823 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 ANKRD20A1Q5TYW2 823 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 WIZO95785 1651 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
HMGA2-210ENST00000541363 KLHL14Q9P2G3 628 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 GOLGA8CPA6NN73 597 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 VPS37BQ9H9H4 285 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 PLCD1P51178 756 aa17.03■□□□□ 0.32
HMGA2-210ENST00000541363 BCRP11274 1271 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 SECISBP2LQ93073 1101 aaKnown RBP17.02■□□□□ 0.32
HMGA2-210ENST00000541363 VEZTQ9HBM0 779 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 UBE3BQ7Z3V4 1068 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 TBC1D8BQ0IIM8 1120 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 SLC8A1P32418 973 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 PLIN2Q99541 437 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
HMGA2-210ENST00000541363 EXOC5O00471 708 aa17.02■□□□□ 0.31
HMGA2-210ENST00000541363 RIPOR2Q9Y4F9 1068 aa17.02■□□□□ 0.31
HMGA2-210ENST00000541363 DAPK1P53355 1430 aa17.02■□□□□ 0.31
HMGA2-210ENST00000541363 ATICP31939 592 aa17.02■□□□□ 0.31
HMGA2-210ENST00000541363 SLC9C1Q4G0N8 1177 aa17.02■□□□□ 0.31
HMGA2-210ENST00000541363 DKC1O60832 514 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMGA2-210ENST00000541363 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
HMGA2-210ENST00000541363 CCDC13Q8IYE1 715 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 CHMP6Q96FZ7 201 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 IPO11Q9UI26 975 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms