RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 ZSCAN29Q8IWY8 852 aaPredicted RBP25.47■■□□□ 1.67
LTBR-205ENST00000535739 SLF2Q8IX21 1173 aa25.47■■□□□ 1.67
LTBR-205ENST00000535739 CLUAP1Q96AJ1 413 aa25.47■■□□□ 1.67
LTBR-205ENST00000535739 TMEM106CQ9BVX2 250 aa25.47■■□□□ 1.67
LTBR-205ENST00000535739 DDX4Q9NQI0 724 aaKnown RBP25.47■■□□□ 1.67
LTBR-205ENST00000535739 GNAI2P04899 355 aa25.46■■□□□ 1.67
LTBR-205ENST00000535739 SLURP2P0DP57 97 aa25.46■■□□□ 1.67
LTBR-205ENST00000535739 ERICH6Q7L0X2 663 aa25.46■■□□□ 1.67
LTBR-205ENST00000535739 MROH7-TTC4A0A0A0MT08 1334 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 PNMA6EA0A0J9YXQ4 647 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 DDTLA6NHG4 134 aaPredicted RBP25.45■■□□□ 1.66
LTBR-205ENST00000535739 MYCP01106 439 aaPredicted RBP25.45■■□□□ 1.66
LTBR-205ENST00000535739 CTGFP29279 349 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 MECOMQ03112 1051 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 PICALMQ13492 652 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 PI16Q6UXB8 463 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 SH3TC2Q8TF17 1288 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 ZNF384Q8TF68 577 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 HMG20BQ9P0W2 317 aa25.45■■□□□ 1.66
LTBR-205ENST00000535739 ADGRA2Q96PE1 1338 aa25.44■■□□□ 1.66
LTBR-205ENST00000535739 PTPRFP10586 1907 aa25.44■■□□□ 1.66
LTBR-205ENST00000535739 CXCL11O14625 94 aa25.44■■□□□ 1.66
LTBR-205ENST00000535739 SCYL3Q8IZE3 742 aa25.44■■□□□ 1.66
LTBR-205ENST00000535739 DOCK1Q14185 1865 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 PHIPQ8WWQ0 1821 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 GNRH1P01148 92 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 SLC4A8Q2Y0W8 1093 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 GORABQ5T7V8 394 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 GPAT2Q6NUI2 795 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 ZHX2Q9Y6X8 837 aa25.43■■□□□ 1.66
LTBR-205ENST00000535739 GPR75-ASB3A0A0A6YYF3 556 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 PTPRAP18433 802 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 PSMC4P43686 418 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 RHBDL3P58872 404 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 MAP3K10Q02779 954 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 G3BP1Q13283 466 aaKnown RBP eCLIP25.42■■□□□ 1.66
LTBR-205ENST00000535739 TBC1D9Q6ZT07 1266 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 SPATA5Q8NB90 893 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 TRIM47Q96LD4 638 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 PICK1Q9NRD5 415 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 MGAMO43451 1857 aa25.42■■□□□ 1.66
LTBR-205ENST00000535739 CYP2C8P10632 490 aa25.4■■□□□ 1.66
LTBR-205ENST00000535739 ARID4AP29374 1257 aaPredicted RBP25.4■■□□□ 1.66
LTBR-205ENST00000535739 PRMT2P55345 433 aa25.4■■□□□ 1.66
LTBR-205ENST00000535739 TMEM57Q8N5G2 664 aa25.4■■□□□ 1.66
LTBR-205ENST00000535739 NSUN4Q96CB9 384 aaKnown RBP25.4■■□□□ 1.66
LTBR-205ENST00000535739 PARK7Q99497 189 aaKnown RBP25.4■■□□□ 1.66
LTBR-205ENST00000535739 SRRDQ9UH36 339 aa25.4■■□□□ 1.66
LTBR-205ENST00000535739 AFG3L2Q9Y4W6 797 aa25.4■■□□□ 1.66
LTBR-205ENST00000535739 A0A0G2JLL6 359 aaPredicted RBP25.39■■□□□ 1.66
LTBR-205ENST00000535739 FMNL1O95466 1100 aaPredicted RBP25.39■■□□□ 1.66
LTBR-205ENST00000535739 PRRT2Q7Z6L0 340 aaPredicted RBP25.39■■□□□ 1.66
LTBR-205ENST00000535739 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.39■■□□□ 1.66
LTBR-205ENST00000535739 CTNND1O60716 968 aaKnown RBP25.38■■□□□ 1.65
LTBR-205ENST00000535739 OSBPP22059 807 aa25.38■■□□□ 1.65
LTBR-205ENST00000535739 MCAMP43121 646 aa25.38■■□□□ 1.65
LTBR-205ENST00000535739 GADL1Q6ZQY3 521 aa25.38■■□□□ 1.65
LTBR-205ENST00000535739 RAI14Q9P0K7 980 aa25.38■■□□□ 1.65
LTBR-205ENST00000535739 LDHCP07864 332 aa25.37■■□□□ 1.65
LTBR-205ENST00000535739 BCRP11274 1271 aa25.37■■□□□ 1.65
LTBR-205ENST00000535739 HOXD10P28358 340 aa25.37■■□□□ 1.65
LTBR-205ENST00000535739 GSTO1P78417 241 aa25.37■■□□□ 1.65
LTBR-205ENST00000535739 ZKSCAN2Q63HK3 967 aa25.37■■□□□ 1.65
LTBR-205ENST00000535739 FASTKD5Q7L8L6 764 aaKnown RBP25.37■■□□□ 1.65
LTBR-205ENST00000535739 CCDC84Q86UT8 332 aaPredicted RBP25.37■■□□□ 1.65
LTBR-205ENST00000535739 MIER1Q8N108 512 aa25.37■■□□□ 1.65
LTBR-205ENST00000535739 MYO5AQ9Y4I1 1855 aaKnown RBP25.36■■□□□ 1.65
LTBR-205ENST00000535739 FAM196BA6NMK8 535 aa25.36■■□□□ 1.65
LTBR-205ENST00000535739 ATAD5Q96QE3 1844 aa25.35■■□□□ 1.65
LTBR-205ENST00000535739 CEP290O15078 2479 aa25.35■■□□□ 1.65
LTBR-205ENST00000535739 NPM3O75607 178 aaKnown RBP25.35■■□□□ 1.65
LTBR-205ENST00000535739 UQCRFS1P1P0C7P4 283 aa25.35■■□□□ 1.65
LTBR-205ENST00000535739 MTFR1Q15390 333 aa25.35■■□□□ 1.65
LTBR-205ENST00000535739 RAET1EQ8TD07 263 aa25.35■■□□□ 1.65
LTBR-205ENST00000535739 MYPNQ86TC9 1320 aa25.35■■□□□ 1.65
LTBR-205ENST00000535739 TRIM75PA6NK02 468 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 TBC1D12O60347 775 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 POLA2Q14181 598 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 GCC1Q96CN9 775 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.34■■□□□ 1.65
LTBR-205ENST00000535739 SNRKQ9NRH2 765 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 LRP2BPQ9P2M1 347 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 DOCK3Q8IZD9 2030 aa25.34■■□□□ 1.65
LTBR-205ENST00000535739 MAP4K4O95819 1239 aaPredicted RBP25.33■■□□□ 1.65
LTBR-205ENST00000535739 OSBPL5Q9H0X9 879 aaPredicted RBP25.33■■□□□ 1.65
LTBR-205ENST00000535739 C1orf115Q9H7X2 142 aa25.33■■□□□ 1.65
LTBR-205ENST00000535739 GRK4P32298 578 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 FCGRTP55899 365 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 ATP8B2P98198 1209 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 PRKCZQ05513 592 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 OS9Q13438 667 aaPredicted RBP25.32■■□□□ 1.64
LTBR-205ENST00000535739 TNNI3KQ59H18 835 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 TEX11Q8IYF3 940 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 SSH3Q8TE77 659 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 DBNDD2Q9BQY9 259 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 SLC45A1Q9Y2W3 748 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 FPGT-TNNI3KV9GXZ4 949 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 CDK5RAP2Q96SN8 1893 aa25.32■■□□□ 1.64
LTBR-205ENST00000535739 TTC39AQ5SRH9 613 aa25.31■■□□□ 1.64
LTBR-205ENST00000535739 SH3RF3Q8TEJ3 882 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms