RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 VGLL4Q14135 290 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 FTSJ3Q8IY81 847 aaKnown RBP13.32□□□□□ -0.28
CCDC60-202ENST00000535685 IDI2Q9BXS1 227 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 CSADQ9Y600 493 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 DOCK2Q92608 1830 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 KIAA0100Q14667 2235 aaKnown RBP13.31□□□□□ -0.28
CCDC60-202ENST00000535685 FKTNO75072 461 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 ENTPD3O75355 529 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
CCDC60-202ENST00000535685 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 OPTNQ96CV9 577 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 ZNF341Q9BYN7 854 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 ELP3Q9H9T3 547 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 FAM198AQ9UFP1 575 aa13.31□□□□□ -0.28
CCDC60-202ENST00000535685 MYO5AQ9Y4I1 1855 aaKnown RBP13.3□□□□□ -0.28
CCDC60-202ENST00000535685 CCDC85CA6NKD9 419 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 MS4A1P11836 297 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 GTF2A2P52657 109 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 ZNF512BQ96KM6 892 aaPredicted RBP13.3□□□□□ -0.28
CCDC60-202ENST00000535685 NEUROD6Q96NK8 337 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 PTPN18Q99952 460 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 R3HDMLQ9H3Y0 253 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 ZCCHC17Q9NP64 241 aaKnown RBP13.3□□□□□ -0.28
CCDC60-202ENST00000535685 USP40Q9NVE5 1235 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 HMG20BQ9P0W2 317 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 SNCAIPQ9Y6H5 919 aa13.3□□□□□ -0.28
CCDC60-202ENST00000535685 GPR75-ASB3A0A0A6YYF3 556 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 NFIAQ12857 509 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 NOL9Q5SY16 702 aaKnown RBP13.29□□□□□ -0.28
CCDC60-202ENST00000535685 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
CCDC60-202ENST00000535685 ITPRIPQ8IWB1 547 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 SPATA5Q8NB90 893 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 ATRNL1Q5VV63 1379 aa13.29□□□□□ -0.28
CCDC60-202ENST00000535685 PPP1R37O75864 691 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 LDHCP07864 332 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 PPATQ06203 517 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 PPIL2Q13356 520 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 TNNI3KQ59H18 835 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 ZNF384Q8TF68 577 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 BRI3BPQ8WY22 251 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 FPGT-TNNI3KV9GXZ4 949 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 MROH7-TTC4A0A0A0MT08 1334 aa13.28□□□□□ -0.28
CCDC60-202ENST00000535685 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.28
CCDC60-202ENST00000535685 PTPRFP10586 1907 aa13.27□□□□□ -0.28
CCDC60-202ENST00000535685 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
CCDC60-202ENST00000535685 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-202ENST00000535685 CETPP11597 493 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 MCAMP43121 646 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 RGS3P49796 1198 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 RHBDL3P58872 404 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 GSTO1P78417 241 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 MECOMQ03112 1051 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 CRHR2Q13324 411 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 CEP85Q6P2H3 762 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 FBXO46Q6PJ61 603 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-202ENST00000535685 ZKSCAN4Q969J2 545 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-202ENST00000535685 NSUN4Q96CB9 384 aaKnown RBP13.27□□□□□ -0.29
CCDC60-202ENST00000535685 COL2A1P02458 1487 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-202ENST00000535685 MAST2Q6P0Q8 1798 aa13.27□□□□□ -0.29
CCDC60-202ENST00000535685 CCL15-CCL14A0A0B4J2E2 113 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 INPP5BP32019 993 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 BTDP43251 543 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 TCP10Q12799 353 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 CCL15Q16663 113 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 FOCADQ5VW36 1801 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 ZFPM1Q8IX07 1006 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 PHIPQ8WWQ0 1821 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 HPS5Q9UPZ3 1129 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
CCDC60-202ENST00000535685 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 IRF6O14896 467 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 TBC1D12O60347 775 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 OS9Q13438 667 aaPredicted RBP13.25□□□□□ -0.29
CCDC60-202ENST00000535685 PI16Q6UXB8 463 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 C1orf115Q9H7X2 142 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 DDX4Q9NQI0 724 aaKnown RBP13.25□□□□□ -0.29
CCDC60-202ENST00000535685 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
CCDC60-202ENST00000535685 PPP4CP60510 307 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 SP3Q02447 781 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 TMED8Q6PL24 325 aaPredicted RBP13.24□□□□□ -0.29
CCDC60-202ENST00000535685 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms