RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GADL1Q6ZQY3 521 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 G2E3Q7L622 706 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 TSPYL6Q8N831 410 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 CHMP3Q9Y3E7 222 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 MYH3P11055 1940 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 FOSL2P15408 326 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 TCP10Q12799 353 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 LDHAL6AQ6ZMR3 332 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 USP38Q8NB14 1042 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 CCER1Q8TC90 406 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-206ENST00000535290 FAM151AQ8WW52 585 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 LBHD1Q9BQE6 289 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-206ENST00000535290 MRIQ9BWK5 157 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 SLC45A1Q9Y2W3 748 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 MGAMO43451 1857 aa10.57□□□□□ -0.72
CLIP1-206ENST00000535290 PHF20L1A8MW92 1017 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 PTPRAP18433 802 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 MAP3K12Q12852 859 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 NFIAQ12857 509 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 UBE4AQ14139 1066 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 SHHQ15465 462 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 MAP3K21Q5TCX8 1036 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 FBXO33Q7Z6M2 555 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 TRIB2Q92519 343 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 CNNM1Q9NRU3 951 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 AFG3L2Q9Y4W6 797 aa10.56□□□□□ -0.72
CLIP1-206ENST00000535290 DDX60LQ5H9U9 1706 aaKnown RBP10.55□□□□□ -0.72
CLIP1-206ENST00000535290 LAMA2P24043 3122 aaKnown RBP10.55□□□□□ -0.72
CLIP1-206ENST00000535290 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
CLIP1-206ENST00000535290 FAM110CQ1W6H9 321 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 EPHA10Q5JZY3 1008 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 C9orf50Q5SZB4 431 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 LMBR1LQ6UX01 489 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 ZFPM1Q8IX07 1006 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-206ENST00000535290 TBC1D22AQ8WUA7 517 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 PIEZO1Q92508 2521 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 CDH23Q9H251 3354 aa10.55□□□□□ -0.72
CLIP1-206ENST00000535290 TRIM75PA6NK02 468 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 SLURP2P0DP57 97 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 CYP2B6P20813 491 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 GNAI1P63096 354 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 TAF7LQ5H9L4 462 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 TREML2Q5T2D2 321 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 LHX8Q68G74 356 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 CDC42EP5Q6NZY7 148 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 CCDC84Q86UT8 332 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-206ENST00000535290 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 PUS3Q9BZE2 481 aaKnown RBP10.54□□□□□ -0.72
CLIP1-206ENST00000535290 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 PICK1Q9NRD5 415 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-206ENST00000535290 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
CLIP1-206ENST00000535290 FRAT2O75474 233 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-206ENST00000535290 CCDC57Q2TAC2 916 aa10.53□□□□□ -0.72
CLIP1-206ENST00000535290 VPS37DQ86XT2 251 aa10.53□□□□□ -0.72
CLIP1-206ENST00000535290 LINS1Q8NG48 757 aa10.53□□□□□ -0.72
CLIP1-206ENST00000535290 AGTPBP1Q9UPW5 1226 aa10.53□□□□□ -0.72
CLIP1-206ENST00000535290 ATRNL1Q5VV63 1379 aa10.52□□□□□ -0.72
CLIP1-206ENST00000535290 CCND3P30281 292 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-206ENST00000535290 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
CLIP1-206ENST00000535290 CACNB2Q08289 660 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-206ENST00000535290 DNAAF4Q8WXU2 420 aa10.52□□□□□ -0.73
CLIP1-206ENST00000535290 STK31Q9BXU1 1019 aa10.52□□□□□ -0.73
CLIP1-206ENST00000535290 CHMP4AQ9BY43 222 aa10.52□□□□□ -0.73
CLIP1-206ENST00000535290 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
CLIP1-206ENST00000535290 DAGLAQ9Y4D2 1042 aa10.52□□□□□ -0.73
CLIP1-206ENST00000535290 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-206ENST00000535290 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-206ENST00000535290 GRIN2CQ14957 1233 aa10.51□□□□□ -0.73
CLIP1-206ENST00000535290 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
CLIP1-206ENST00000535290 SENP6Q9GZR1 1112 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-206ENST00000535290 SUGT1Q9Y2Z0 365 aa10.51□□□□□ -0.73
CLIP1-206ENST00000535290 A0A1B0GUL6 1792 aa10.51□□□□□ -0.73
CLIP1-206ENST00000535290 MAST3O60307 1309 aa10.51□□□□□ -0.73
CLIP1-206ENST00000535290 BDP1A6H8Y1 2624 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 PEX10O60683 326 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 FLIIQ13045 1269 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 CCL14Q16627 93 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 SH3BP5LQ7L8J4 393 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 USP40Q9NVE5 1235 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 PRKAG2Q9UGJ0 569 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
CLIP1-206ENST00000535290 CTNND1O60716 968 aaKnown RBP10.49□□□□□ -0.73
CLIP1-206ENST00000535290 XRCC5P13010 732 aaKnown RBP10.49□□□□□ -0.73
CLIP1-206ENST00000535290 RTP1P59025 263 aa10.49□□□□□ -0.73
CLIP1-206ENST00000535290 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
CLIP1-206ENST00000535290 FKBP5Q13451 457 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-206ENST00000535290 CAVIN4Q5BKX8 364 aa10.49□□□□□ -0.73
CLIP1-206ENST00000535290 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
CLIP1-206ENST00000535290 BADQ92934 168 aa10.49□□□□□ -0.73
CLIP1-206ENST00000535290 ASCC2Q9H1I8 757 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-206ENST00000535290 LRRFIP2Q9Y608 721 aaKnown RBP10.49□□□□□ -0.73
CLIP1-206ENST00000535290 APAF1O14727 1248 aa10.48□□□□□ -0.73
CLIP1-206ENST00000535290 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-206ENST00000535290 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms