RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 STK24Q9Y6E0 443 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 ZBED4O75132 1171 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 ASXL2Q76L83 1435 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 TNNI3KQ59H18 835 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 FPGT-TNNI3KV9GXZ4 949 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 AKR1B15C9JRZ8 316 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 PLEKHM2Q8IWE5 1019 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 GPR161Q8N6U8 529 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 XAGE2Q96GT9 111 aa20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 INTS4Q96HW7 963 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-203ENST00000535236 A0A1B0GVL5 298 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 DAPK3O43293 454 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 PPP1R21Q6ZMI0 780 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 CDAN1Q8IWY9 1227 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 SUPT20HQ8NEM7 779 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 CCDC26Q8TAB7 109 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 CRCPO75575 148 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 NCAPH2Q6IBW4 605 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 ZNF790Q6PG37 636 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 CPLX4Q7Z7G2 160 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 ARFGAP2Q8N6H7 521 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 NOX5Q96PH1 765 aa20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 V9GYY5 206 aaPredicted RBP20.33■□□□□ 0.85
SFSWAP-203ENST00000535236 RHOXF2BP0C7M4 288 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 NAP1L3Q99457 506 aaPredicted RBP20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 RHOXF2Q9BQY4 288 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 GMNNO75496 209 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 ZWINTO95229 277 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 TXKP42681 527 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 TBC1D8BQ0IIM8 1120 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 UAP1Q16222 522 aaPredicted RBP20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 ZNF518AQ6AHZ1 1483 aa20.33■□□□□ 0.84
SFSWAP-203ENST00000535236 RPS6KB1P23443 525 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 AZI2Q9H6S1 392 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 UBLCP1Q8WVY7 318 aaPredicted RBP20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 GEN1Q17RS7 908 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 DAAM2Q86T65 1068 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 PHACTR3Q96KR7 559 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 CCDC160A6NGH7 325 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 PDE6BP35913 854 aa20.32■□□□□ 0.84
SFSWAP-203ENST00000535236 SETDB1Q15047 1291 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 KCNA6P17658 529 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 FAM160A1Q05DH4 1040 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 DDX39AO00148 427 aaKnown RBP20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 SLC1A4P43007 532 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 ADCY7P51828 1080 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 BAG1Q99933 345 aaPredicted RBP20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 BEGAINQ9BUH8 593 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 MAP3K19Q56UN5 1328 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 SYT10Q6XYQ8 523 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 SAMD15Q9P1V8 674 aa20.31■□□□□ 0.84
SFSWAP-203ENST00000535236 CETN3O15182 167 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 PRKG1Q13976 671 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 CEP128Q6ZU80 1094 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 APPBP2Q92624 585 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 ASIC2Q16515 512 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 ZMYND15Q9H091 742 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 STK10O94804 968 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 TRIM14Q14142 442 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 NKIRAS1Q9NYS0 192 aa20.3■□□□□ 0.84
SFSWAP-203ENST00000535236 ZEB2O60315 1214 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 PRDM1O75626 825 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 CLUL1Q15846 466 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 CCDC87Q9NVE4 849 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 ZBTB40Q9NUA8 1239 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 DBNDD2Q9BQY9 259 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 MAEAQ7L5Y9 396 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 NACA2Q9H009 215 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 VPS16Q9H269 839 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 PFDN4Q9NQP4 134 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 CAPN2P17655 700 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 ATP5DP30049 168 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 DNM2P50570 870 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 ANO1Q5XXA6 986 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 GPATCH11Q8N954 259 aa20.29■□□□□ 0.84
SFSWAP-203ENST00000535236 M0QZ92 97 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 GPAA1O43292 621 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 GABPB2Q8TAK5 448 aaPredicted RBP20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 CCDC110Q8TBZ0 833 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 SLC27A2O14975 620 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 NONOQ15233 471 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■■□□ 17.7
SFSWAP-203ENST00000535236 DNAJC21Q5F1R6 531 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 NSMFQ6X4W1 530 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 MKRN1Q9UHC7 482 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 KCNH3Q9ULD8 1083 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 ZKSCAN5Q9Y2L8 839 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 TUBBP07437 444 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 TTC38Q5R3I4 469 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 TAF5LO75529 589 aa20.28■□□□□ 0.84
SFSWAP-203ENST00000535236 CPA1P15085 419 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms