RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 ZNF609O15014 1411 aa11.08□□□□□ -0.64
CCDC90B-219ENST00000534753 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 FOXN1O15353 648 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 MYO1BO43795 1136 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 IL15P40933 162 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 MYSM1Q5VVJ2 828 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 LPIN2Q92539 896 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 PRMT6Q96LA8 375 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 FAM205AQ6ZU69 1335 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 PITPNM2Q9BZ72 1349 aa11.07□□□□□ -0.64
CCDC90B-219ENST00000534753 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 UBE2Q2LH0YL09 131 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 CIAO1O76071 339 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 RLBP1P12271 317 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 FGFR2P21802 821 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 NF2P35240 595 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 TFCP2Q12800 502 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 GRIK5Q16478 980 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 RGMBQ6NW40 437 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 NEUROD6Q96NK8 337 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 ZMYND15Q9H091 742 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
CCDC90B-219ENST00000534753 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 ST18O60284 1047 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 ADORA1P30542 326 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 MMP14P50281 582 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 TIMM10P62072 90 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 FKBP1AP62942 108 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 MAP2K1Q02750 393 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 GORABQ5T7V8 394 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 TDRD3Q9H7E2 651 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 GNL3LQ9NVN8 582 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 FZD1Q9UP38 647 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 AOX1Q06278 1338 aa11.05□□□□□ -0.64
CCDC90B-219ENST00000534753 TCP10L2B9ZVM9 353 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 DNAJB2P25686 324 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 PHKA1P46020 1223 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 CRKP46108 304 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 LBX1P52954 281 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 TBC1D22AQ8WUA7 517 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 ZBED3Q96IU2 234 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 ZIC5Q96T25 663 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 DEFB129Q9H1M3 183 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 WBP1LQ9NX94 342 aa11.04□□□□□ -0.64
CCDC90B-219ENST00000534753 A0A1B0GUL7 405 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 CTCFP49711 727 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 CACNB3P54284 484 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 TEKT1Q969V4 418 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 KIAA1468Q9P260 1216 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 ZNF70Q9UC06 446 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 SERPINA10Q9UK55 444 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 RCAN3Q9UKA8 241 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 ANGEL1Q9UNK9 670 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
CCDC90B-219ENST00000534753 PCNTO95613 3336 aa11.02□□□□□ -0.64
CCDC90B-219ENST00000534753 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 CD46P15529 392 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 MAP2K2P36507 400 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 NOGQ13253 232 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 MTX1Q13505 466 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 RASA3Q14644 834 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 CCDC102BQ68D86 513 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 ARMC9Q7Z3E5 817 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 TNS4Q8IZW8 715 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 WDR66Q8TBY9 1149 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 LIMD1Q9UGP4 676 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 COG6Q9Y2V7 657 aa11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-219ENST00000534753 FAM155AB1AL88 458 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 LDHBP07195 334 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 CLK2P49760 499 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 FKBP1BP68106 108 aa11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 DIXDC1Q155Q3 683 aa11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 NBPF12Q5TAG4 269 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 SPIRE2Q8WWL2 714 aa11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 ABCF2Q9UG63 623 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms