RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	ARHGEF6	Q15052	776 aa		29.94	■■■□□ 2.38
RELA-223	ENST00000534283	SSH3	Q8TE77	659 aa		29.94	■■■□□ 2.38
RELA-223	ENST00000534283	ARHGAP39	Q9C0H5	1083 aa		29.94	■■■□□ 2.38
RELA-223	ENST00000534283	CXCL11	O14625	94 aa		29.93	■■■□□ 2.38
RELA-223	ENST00000534283	LACTB	P83111	547 aa	Predicted RBP	29.93	■■■□□ 2.38
RELA-223	ENST00000534283	NSUN4	Q96CB9	384 aa	Known RBP	29.93	■■■□□ 2.38
RELA-223	ENST00000534283	PDHX	O00330	501 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	NPM3	O75607	178 aa	Known RBP	29.92	■■■□□ 2.38
RELA-223	ENST00000534283	SLC34A2	O95436	690 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	MCAM	P43121	646 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	GORAB	Q5T7V8	394 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	GPAT2	Q6NUI2	795 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	SCYL3	Q8IZE3	742 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	GPR108	Q9NPR9	543 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	PTCH2	Q9Y6C5	1203 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	ADGRA2	Q96PE1	1338 aa		29.92	■■■□□ 2.38
RELA-223	ENST00000534283	RLBP1	P12271	317 aa		29.91	■■■□□ 2.38
RELA-223	ENST00000534283	ZNF333	Q96JL9	665 aa		29.91	■■■□□ 2.38
RELA-223	ENST00000534283	ZBTB7B	O15156	539 aa	Predicted RBP	29.9	■■■□□ 2.38
RELA-223	ENST00000534283	PTPRA	P18433	802 aa		29.9	■■■□□ 2.38
RELA-223	ENST00000534283	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	29.9	■■■□□ 2.38
RELA-223	ENST00000534283	MYH13	Q9UKX3	1938 aa		29.9	■■■□□ 2.38
RELA-223	ENST00000534283	UQCRFS1P1	P0C7P4	283 aa		29.89	■■■□□ 2.38
RELA-223	ENST00000534283	CTGF	P29279	349 aa		29.89	■■■□□ 2.38
RELA-223	ENST00000534283	PICALM	Q13492	652 aa		29.89	■■■□□ 2.38
RELA-223	ENST00000534283	PRPF38B	Q5VTL8	546 aa	Known RBP	29.89	■■■□□ 2.38
RELA-223	ENST00000534283	CPA4	Q9UI42	421 aa		29.89	■■■□□ 2.38
RELA-223	ENST00000534283	AFG3L2	Q9Y4W6	797 aa		29.89	■■■□□ 2.38
RELA-223	ENST00000534283	ZHX2	Q9Y6X8	837 aa		29.89	■■■□□ 2.38
RELA-223	ENST00000534283	PDE4DIP	Q5VU43	2346 aa		29.89	■■■□□ 2.37
RELA-223	ENST00000534283	MAP4K4	O95819	1239 aa	Predicted RBP	29.88	■■■□□ 2.37
RELA-223	ENST00000534283	LDHC	P07864	332 aa		29.88	■■■□□ 2.37
RELA-223	ENST00000534283	GSTO1	P78417	241 aa		29.88	■■■□□ 2.37
RELA-223	ENST00000534283	TBC1D12	O60347	775 aa		29.87	■■■□□ 2.37
RELA-223	ENST00000534283	CTNND1	O60716	968 aa	Known RBP	29.87	■■■□□ 2.37
RELA-223	ENST00000534283	TNNI3K	Q59H18	835 aa		29.87	■■■□□ 2.37
RELA-223	ENST00000534283	DIEXF	Q68CQ4	756 aa	Known RBP	29.87	■■■□□ 2.37
RELA-223	ENST00000534283	C1orf115	Q9H7X2	142 aa		29.87	■■■□□ 2.37
RELA-223	ENST00000534283	NOP58	Q9Y2X3	529 aa	Known RBP	29.87	■■■□□ 2.37
RELA-223	ENST00000534283	FPGT-TNNI3K	V9GXZ4	949 aa		29.87	■■■□□ 2.37
RELA-223	ENST00000534283		A0A0G2JLL6	359 aa	Predicted RBP	29.86	■■■□□ 2.37
RELA-223	ENST00000534283	GNRH1	P01148	92 aa		29.86	■■■□□ 2.37
RELA-223	ENST00000534283	PRRT2	Q7Z6L0	340 aa	Predicted RBP	29.86	■■■□□ 2.37
RELA-223	ENST00000534283	DBNDD2	Q9BQY9	259 aa		29.86	■■■□□ 2.37
RELA-223	ENST00000534283	PICK1	Q9NRD5	415 aa		29.86	■■■□□ 2.37
RELA-223	ENST00000534283	RAI14	Q9P0K7	980 aa		29.86	■■■□□ 2.37
RELA-223	ENST00000534283	EN2	P19622	333 aa	Predicted RBP	29.85	■■■□□ 2.37
RELA-223	ENST00000534283	KIF22	Q14807	665 aa		29.85	■■■□□ 2.37
RELA-223	ENST00000534283	CENPF	P49454	3210 aa		29.84	■■■□□ 2.37
RELA-223	ENST00000534283	SURF6	O75683	361 aa	Known RBP	29.84	■■■□□ 2.37
RELA-223	ENST00000534283	SLC9C1	Q4G0N8	1177 aa		29.84	■■■□□ 2.37
RELA-223	ENST00000534283	FTSJ3	Q8IY81	847 aa	Known RBP	29.83	■■■□□ 2.37
RELA-223	ENST00000534283	ZNF512B	Q96KM6	892 aa	Predicted RBP	29.83	■■■□□ 2.37
RELA-223	ENST00000534283	TRIM47	Q96LD4	638 aa		29.83	■■■□□ 2.37
RELA-223	ENST00000534283	SNRK	Q9NRH2	765 aa		29.83	■■■□□ 2.37
RELA-223	ENST00000534283	LRP2BP	Q9P2M1	347 aa		29.83	■■■□□ 2.37
RELA-223	ENST00000534283	BCR	P11274	1271 aa		29.82	■■■□□ 2.36
RELA-223	ENST00000534283	PRMT2	P55345	433 aa		29.82	■■■□□ 2.36
RELA-223	ENST00000534283	FASTKD5	Q7L8L6	764 aa	Known RBP	29.82	■■■□□ 2.36
RELA-223	ENST00000534283	NBPF11	Q86T75	865 aa		29.82	■■■□□ 2.36
RELA-223	ENST00000534283	ITPRIP	Q8IWB1	547 aa		29.82	■■■□□ 2.36
RELA-223	ENST00000534283	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.82	■■■□□ 2.36
RELA-223	ENST00000534283	MYH2	Q9UKX2	1941 aa		29.81	■■■□□ 2.36
RELA-223	ENST00000534283	CYP2C8	P10632	490 aa		29.81	■■■□□ 2.36
RELA-223	ENST00000534283	PSMC4	P43686	418 aa		29.81	■■■□□ 2.36
RELA-223	ENST00000534283	PARK7	Q99497	189 aa	Known RBP	29.81	■■■□□ 2.36
RELA-223	ENST00000534283	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	29.81	■■■□□ 2.36
RELA-223	ENST00000534283	CYP2E1	P05181	493 aa	Predicted RBP	29.8	■■■□□ 2.36
RELA-223	ENST00000534283	CCDC158	Q5M9N0	1113 aa		29.8	■■■□□ 2.36
RELA-223	ENST00000534283	TTC39A	Q5SRH9	613 aa		29.8	■■■□□ 2.36
RELA-223	ENST00000534283	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	29.8	■■■□□ 2.36
RELA-223	ENST00000534283	SH3TC2	Q8TF17	1288 aa		29.8	■■■□□ 2.36
RELA-223	ENST00000534283	SRRD	Q9UH36	339 aa		29.8	■■■□□ 2.36
RELA-223	ENST00000534283	SLC45A1	Q9Y2W3	748 aa		29.8	■■■□□ 2.36
RELA-223	ENST00000534283	COL2A1	P02458	1487 aa	Predicted RBP	29.8	■■■□□ 2.36
RELA-223	ENST00000534283	FAM196B	A6NMK8	535 aa		29.79	■■■□□ 2.36
RELA-223	ENST00000534283	PPP4C	P60510	307 aa		29.79	■■■□□ 2.36
RELA-223	ENST00000534283	OS9	Q13438	667 aa	Predicted RBP	29.79	■■■□□ 2.36
RELA-223	ENST00000534283	CCDC84	Q86UT8	332 aa	Predicted RBP	29.79	■■■□□ 2.36
RELA-223	ENST00000534283	TMEM106C	Q9BVX2	250 aa		29.79	■■■□□ 2.36
RELA-223	ENST00000534283	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.79	■■■□□ 2.36
RELA-223	ENST00000534283	DBNL	Q9UJU6	430 aa	Known RBP	29.79	■■■□□ 2.36
RELA-223	ENST00000534283	ZBED9	Q6R2W3	1325 aa		29.78	■■■□□ 2.36
RELA-223	ENST00000534283	ECM2	O94769	699 aa	Predicted RBP	29.78	■■■□□ 2.36
RELA-223	ENST00000534283	OSBP	P22059	807 aa		29.78	■■■□□ 2.36
RELA-223	ENST00000534283	RRP1B	Q14684	758 aa	Known RBP	29.78	■■■□□ 2.36
RELA-223	ENST00000534283	TEX11	Q8IYF3	940 aa		29.78	■■■□□ 2.36
RELA-223	ENST00000534283	MKI67	P46013	3256 aa	Known RBP	29.77	■■■□□ 2.36
RELA-223	ENST00000534283	ADGRA1	Q86SQ6	560 aa		29.77	■■■□□ 2.36
RELA-223	ENST00000534283	EAF2	Q96CJ1	260 aa	Predicted RBP	29.77	■■■□□ 2.36
RELA-223	ENST00000534283	TLR7	Q9NYK1	1049 aa	Known RBP	29.77	■■■□□ 2.36
RELA-223	ENST00000534283	BRCA2	P51587	3418 aa		29.77	■■■□□ 2.36
RELA-223	ENST00000534283	TRIM75P	A6NK02	468 aa		29.76	■■■□□ 2.35
RELA-223	ENST00000534283	ZAP70	P43403	619 aa		29.76	■■■□□ 2.35
RELA-223	ENST00000534283	NAA16	Q6N069	864 aa	Predicted RBP	29.76	■■■□□ 2.35
RELA-223	ENST00000534283	CEP85	Q6P2H3	762 aa		29.76	■■■□□ 2.35
RELA-223	ENST00000534283	GADL1	Q6ZQY3	521 aa		29.76	■■■□□ 2.35
RELA-223	ENST00000534283	PIH1D3	Q9NQM4	214 aa	Known RBP	29.76	■■■□□ 2.35
RELA-223	ENST00000534283	IGSF3	O75054	1194 aa		29.75	■■■□□ 2.35
RELA-223	ENST00000534283	FMNL1	O95466	1100 aa	Predicted RBP	29.75	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms