RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 MAP3K10Q02779 954 aa21.47■■□□□ 1.03
VPS51-213ENST00000533827 TBC1D9Q6ZT07 1266 aa21.47■■□□□ 1.03
VPS51-213ENST00000533827 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.47■■□□□ 1.03
VPS51-213ENST00000533827 NSUN4Q96CB9 384 aaKnown RBP21.47■■□□□ 1.03
VPS51-213ENST00000533827 C1orf115Q9H7X2 142 aa21.47■■□□□ 1.03
VPS51-213ENST00000533827 KCNH4Q9UQ05 1017 aa21.47■■□□□ 1.03
VPS51-213ENST00000533827 DDTLA6NHG4 134 aaPredicted RBP21.46■■□□□ 1.03
VPS51-213ENST00000533827 PHF20L1A8MW92 1017 aa21.46■■□□□ 1.03
VPS51-213ENST00000533827 TLR2O60603 784 aa21.46■■□□□ 1.03
VPS51-213ENST00000533827 UQCRFS1P1P0C7P4 283 aa21.46■■□□□ 1.03
VPS51-213ENST00000533827 TNNI3KQ59H18 835 aa21.46■■□□□ 1.03
VPS51-213ENST00000533827 ITPRIPQ8IWB1 547 aa21.46■■□□□ 1.03
VPS51-213ENST00000533827 FPGT-TNNI3KV9GXZ4 949 aa21.46■■□□□ 1.03
VPS51-213ENST00000533827 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
VPS51-213ENST00000533827 NPM3O75607 178 aaKnown RBP21.44■■□□□ 1.02
VPS51-213ENST00000533827 SURF6O75683 361 aaKnown RBP21.44■■□□□ 1.02
VPS51-213ENST00000533827 LDHCP07864 332 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 GSTO1P78417 241 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 PICALMQ13492 652 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 MOGSQ13724 837 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 ANKRD23Q86SG2 305 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 ZSCAN29Q8IWY8 852 aaPredicted RBP21.44■■□□□ 1.02
VPS51-213ENST00000533827 DBNDD2Q9BQY9 259 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 CENPFP49454 3210 aa21.44■■□□□ 1.02
VPS51-213ENST00000533827 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
VPS51-213ENST00000533827 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
VPS51-213ENST00000533827 SCYL3Q8IZE3 742 aa21.43■■□□□ 1.02
VPS51-213ENST00000533827 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
VPS51-213ENST00000533827 SLURP2P0DP57 97 aa21.42■■□□□ 1.02
VPS51-213ENST00000533827 ARHGEF6Q15052 776 aa21.42■■□□□ 1.02
VPS51-213ENST00000533827 CCDC158Q5M9N0 1113 aa21.42■■□□□ 1.02
VPS51-213ENST00000533827 PDHXO00330 501 aa21.41■■□□□ 1.02
VPS51-213ENST00000533827 CXCL11O14625 94 aa21.41■■□□□ 1.02
VPS51-213ENST00000533827 TTC39AQ5SRH9 613 aa21.41■■□□□ 1.02
VPS51-213ENST00000533827 ARMC5Q96C12 935 aa21.41■■□□□ 1.02
VPS51-213ENST00000533827 ZNF512BQ96KM6 892 aaPredicted RBP21.41■■□□□ 1.02
VPS51-213ENST00000533827 SNRKQ9NRH2 765 aa21.41■■□□□ 1.02
VPS51-213ENST00000533827 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
VPS51-213ENST00000533827 TBC1D12O60347 775 aa21.4■■□□□ 1.02
VPS51-213ENST00000533827 PTPRAP18433 802 aa21.4■■□□□ 1.02
VPS51-213ENST00000533827 LACTBP83111 547 aaPredicted RBP21.4■■□□□ 1.02
VPS51-213ENST00000533827 CEP85Q6P2H3 762 aa21.4■■□□□ 1.02
VPS51-213ENST00000533827 C17orf99Q6UX52 265 aa21.4■■□□□ 1.02
VPS51-213ENST00000533827 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
VPS51-213ENST00000533827 DOCK1Q14185 1865 aa21.39■■□□□ 1.02
VPS51-213ENST00000533827 ZSWIM8A7E2V4 1837 aa21.39■■□□□ 1.02
VPS51-213ENST00000533827 MAST2Q6P0Q8 1798 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 ADGRA2Q96PE1 1338 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 CTNND1O60716 968 aaKnown RBP21.39■■□□□ 1.01
VPS51-213ENST00000533827 GPAT2Q6NUI2 795 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 PANK1Q8TE04 598 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 ARHGAP39Q9C0H5 1083 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 PICK1Q9NRD5 415 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 AFG3L2Q9Y4W6 797 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 ZHX2Q9Y6X8 837 aa21.39■■□□□ 1.01
VPS51-213ENST00000533827 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
VPS51-213ENST00000533827 CYP2E1P05181 493 aaPredicted RBP21.38■■□□□ 1.01
VPS51-213ENST00000533827 OSBPL5Q9H0X9 879 aaPredicted RBP21.38■■□□□ 1.01
VPS51-213ENST00000533827 DBNLQ9UJU6 430 aaKnown RBP21.38■■□□□ 1.01
VPS51-213ENST00000533827 PHIPQ8WWQ0 1821 aa21.38■■□□□ 1.01
VPS51-213ENST00000533827 A0A0G2JLL6 359 aaPredicted RBP21.37■■□□□ 1.01
VPS51-213ENST00000533827 KIF22Q14807 665 aa21.37■■□□□ 1.01
VPS51-213ENST00000533827 PRRT2Q7Z6L0 340 aaPredicted RBP21.37■■□□□ 1.01
VPS51-213ENST00000533827 EAF2Q96CJ1 260 aaPredicted RBP21.37■■□□□ 1.01
VPS51-213ENST00000533827 TLR7Q9NYK1 1049 aaKnown RBP21.37■■□□□ 1.01
VPS51-213ENST00000533827 CPA4Q9UI42 421 aa21.37■■□□□ 1.01
VPS51-213ENST00000533827 PTCH2Q9Y6C5 1203 aa21.37■■□□□ 1.01
VPS51-213ENST00000533827 POTEFA5A3E0 1075 aa21.36■■□□□ 1.01
VPS51-213ENST00000533827 IGSF3O75054 1194 aa21.36■■□□□ 1.01
VPS51-213ENST00000533827 GNRH1P01148 92 aa21.36■■□□□ 1.01
VPS51-213ENST00000533827 ZAP70P43403 619 aa21.36■■□□□ 1.01
VPS51-213ENST00000533827 NAA16Q6N069 864 aaPredicted RBP21.36■■□□□ 1.01
VPS51-213ENST00000533827 TEX11Q8IYF3 940 aa21.36■■□□□ 1.01
VPS51-213ENST00000533827 SH3RF3Q8TEJ3 882 aaPredicted RBP21.36■■□□□ 1.01
VPS51-213ENST00000533827 CCDC8Q9H0W5 538 aaPredicted RBP21.36■■□□□ 1.01
VPS51-213ENST00000533827 BRCA2P51587 3418 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 MYO5AQ9Y4I1 1855 aaKnown RBP21.35■■□□□ 1.01
VPS51-213ENST00000533827 FAM196BA6NMK8 535 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 CTGFP29279 349 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 PPP4CP60510 307 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 FASTKD5Q7L8L6 764 aaKnown RBP21.35■■□□□ 1.01
VPS51-213ENST00000533827 ADGRA1Q86SQ6 560 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 ZNF333Q96JL9 665 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.35■■□□□ 1.01
VPS51-213ENST00000533827 AATFQ9NY61 560 aaKnown RBP eCLIP21.35■■□□□ 1.01
VPS51-213ENST00000533827 PTPRFP10586 1907 aa21.35■■□□□ 1.01
VPS51-213ENST00000533827 BAG3O95817 575 aa21.34■■□□□ 1.01
VPS51-213ENST00000533827 MS4A1P11836 297 aa21.34■■□□□ 1.01
VPS51-213ENST00000533827 PARK7Q99497 189 aaKnown RBP21.34■■□□□ 1.01
VPS51-213ENST00000533827 NOL10Q9BSC4 688 aaKnown RBP21.34■■□□□ 1.01
VPS51-213ENST00000533827 PIH1D3Q9NQM4 214 aaKnown RBP21.34■■□□□ 1.01
VPS51-213ENST00000533827 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.34■■□□□ 1.01
VPS51-213ENST00000533827 CYP2C8P10632 490 aa21.33■■□□□ 1.01
VPS51-213ENST00000533827 PRMT2P55345 433 aa21.33■■□□□ 1.01
VPS51-213ENST00000533827 SLC9C1Q4G0N8 1177 aa21.33■■□□□ 1.01
VPS51-213ENST00000533827 NBPF11Q86T75 865 aa21.33■■□□□ 1.01
VPS51-213ENST00000533827 EXOC6BQ9Y2D4 811 aa21.33■■□□□ 1.01
VPS51-213ENST00000533827 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
VPS51-213ENST00000533827 SIPA1L1O43166 1804 aa21.32■■□□□ 1
VPS51-213ENST00000533827 BCRP11274 1271 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms