RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 TBC1D22AQ8WUA7 517 aa11.37□□□□□ -0.59
BEST3-207ENST00000533674 BRI3BPQ8WY22 251 aa11.37□□□□□ -0.59
BEST3-207ENST00000533674 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
BEST3-207ENST00000533674 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
BEST3-207ENST00000533674 ZNF333Q96JL9 665 aa11.37□□□□□ -0.59
BEST3-207ENST00000533674 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
BEST3-207ENST00000533674 IQSEC3Q9UPP2 1182 aaPredicted RBP11.37□□□□□ -0.59
BEST3-207ENST00000533674 MROH5Q6ZUA9 1318 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 TK2O00142 265 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 CACNB3P54284 484 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 SNAPC2Q13487 334 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 EPHA10Q5JZY3 1008 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 FAM43AQ8N2R8 423 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.36□□□□□ -0.59
BEST3-207ENST00000533674 FAM84BQ96KN1 310 aaPredicted RBP11.36□□□□□ -0.59
BEST3-207ENST00000533674 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
BEST3-207ENST00000533674 MAST3O60307 1309 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 ALDH1L1O75891 902 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
BEST3-207ENST00000533674 METTL24Q5JXM2 366 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 ERO1BQ86YB8 467 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 SH3TC2Q8TF17 1288 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
BEST3-207ENST00000533674 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 ARIH1Q9Y4X5 557 aaPredicted RBP11.35□□□□□ -0.59
BEST3-207ENST00000533674 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
BEST3-207ENST00000533674 TLR2O60603 784 aa11.34□□□□□ -0.59
BEST3-207ENST00000533674 GNRH1P01148 92 aa11.34□□□□□ -0.59
BEST3-207ENST00000533674 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
BEST3-207ENST00000533674 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
BEST3-207ENST00000533674 ZKSCAN4Q969J2 545 aaPredicted RBP11.34□□□□□ -0.59
BEST3-207ENST00000533674 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
BEST3-207ENST00000533674 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
BEST3-207ENST00000533674 BTBD19C9JJ37 291 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 PTPREP23469 700 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 FXR1P51114 621 aaKnown RBP eCLIP11.33□□□□□ -0.6
BEST3-207ENST00000533674 PRMT2P55345 433 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
BEST3-207ENST00000533674 CAP1Q01518 475 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 DPF3Q92784 378 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 SUCLG2Q96I99 432 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
BEST3-207ENST00000533674 BIN2Q9UBW5 565 aaPredicted RBP11.33□□□□□ -0.6
BEST3-207ENST00000533674 SNCAIPQ9Y6H5 919 aa11.33□□□□□ -0.6
BEST3-207ENST00000533674 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
BEST3-207ENST00000533674 IRF6O14896 467 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
BEST3-207ENST00000533674 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
BEST3-207ENST00000533674 HOXD10P28358 340 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 PPIL2Q13356 520 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 FAM83AQ86UY5 434 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 ZNF341Q9BYN7 854 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
BEST3-207ENST00000533674 HTTP42858 3142 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
BEST3-207ENST00000533674 H0YGN5 161 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 NBPF7P0C2Y1 421 aaPredicted RBP11.31□□□□□ -0.6
BEST3-207ENST00000533674 PSMC4P43686 418 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 PPATQ06203 517 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 GRIK5Q16478 980 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
BEST3-207ENST00000533674 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 CPA4Q9UI42 421 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
BEST3-207ENST00000533674 PDHXO00330 501 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 HRO43593 1189 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 PDE8BO95263 885 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 BCAMP50895 628 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
BEST3-207ENST00000533674 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 HTATIP2Q9BUP3 242 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
BEST3-207ENST00000533674 RPAP1Q9BWH6 1393 aaPredicted RBP11.29□□□□□ -0.6
BEST3-207ENST00000533674 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 MKI67P46013 3256 aaKnown RBP11.29□□□□□ -0.6
BEST3-207ENST00000533674 ANP32CO43423 234 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 SLC5A1P13866 664 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 GRK4P32298 578 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 UBXN2AP68543 259 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 TCP10Q12799 353 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 ANKRD23Q86SG2 305 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
BEST3-207ENST00000533674 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
BEST3-207ENST00000533674 EPAS1Q99814 870 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms