RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PIK3AP1Q6ZUJ8 805 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 IFNL3Q8IZI9 196 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 NR1I2O75469 434 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 MTX1Q13505 466 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 SYT10Q6XYQ8 523 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 KCNJ14Q9UNX9 436 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 V9GYY5 206 aaPredicted RBP17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 MYO1BO43795 1136 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 NOP2P46087 812 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 TTC38Q5R3I4 469 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 SYCP3Q8IZU3 236 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 OGFOD1Q8N543 542 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 RBM17Q96I25 401 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 EYA3Q99504 573 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 SAP30BPQ9UHR5 308 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 ADGRL3Q9HAR2 1447 aa17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 CTAGE15A4D2H0 777 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 CTAGE8P0CG41 777 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 ADORA1P30542 326 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 CETN2P41208 172 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 UBXN1Q04323 297 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 UBE3CQ15386 1083 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 LETM2Q2VYF4 491 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 SPECC1Q5M775 1068 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 CTAGE6Q86UF2 777 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 CTAGE4Q8IX94 777 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 SAMM50Q9Y512 469 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 CERS3Q8IU89 383 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 CNGA4Q8IV77 575 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 ZNF654Q8IZM8 581 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 MMRN2Q9H8L6 949 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 ARFGAP3Q9NP61 516 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 ATG3Q9NT62 314 aa17.33■□□□□ 0.37
PCDHA3-202ENST00000532566 TRMT1LQ7Z2T5 733 aaKnown RBP17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 PLIN2Q99541 437 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 BAG1Q99933 345 aaPredicted RBP17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 DIP2CQ9Y2E4 1556 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 TMCO5BA8MYB1 307 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 SSR1P43307 286 aaKnown RBP17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 PLCD1P51178 756 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 PPARAQ07869 468 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 SCRN1Q12765 414 aa17.33■□□□□ 0.36
PCDHA3-202ENST00000532566 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 HDAC9Q9UKV0 1011 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 SPDYE3A6NKU9 549 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 KRT83P78385 493 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 CKAP4Q07065 602 aaKnown RBP17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 GGA1Q9UJY5 639 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 LUC7L2Q9Y383 392 aaKnown RBP17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 IL6STP40189 918 aaPredicted RBP17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 PHKA1P46020 1223 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 TAF3Q5VWG9 929 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 MAST3O60307 1309 aa17.32■□□□□ 0.36
PCDHA3-202ENST00000532566 CTAGE9A4FU28 777 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 PPP4R3AQ6IN85 833 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 KIAA1210Q9ULL0 1709 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 KRT86O43790 486 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 KARSQ15046 597 aaKnown RBP17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 KIAA1468Q9P260 1216 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 IMPACTQ9P2X3 320 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 AKR1B15C9JRZ8 316 aaPredicted RBP17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 NECTIN1Q15223 517 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 BCAMP50895 628 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 CCDC42Q96M95 316 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 LZTFL1Q9NQ48 299 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 ZMYM6O95789 1325 aa17.31■□□□□ 0.36
PCDHA3-202ENST00000532566 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 NFE2L3Q9Y4A8 694 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 USP17L12C9JPN9 530 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 USP17L21D6R901 530 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 IGKV5-2P06315 115 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 MRPL12P52815 198 aaKnown RBP17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 KIF5AQ12840 1032 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 USP8P40818 1118 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 POSTNQ15063 836 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 TAX1BP1Q86VP1 789 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 CEP112Q8N8E3 955 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 VPS54Q9P1Q0 977 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 CYP27B1O15528 508 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 PPP1R2P41236 205 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 SIK1P57059 783 aa17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 HLTFQ14527 1009 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHA3-202ENST00000532566 TACC1O75410 805 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms