RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 KLHDC7BQ96G42 594 aa8.31□□□□□ -1.08
USP33-217ENST00000531637 ACTR10Q9NZ32 417 aa8.31□□□□□ -1.08
USP33-217ENST00000531637 PRR36Q9H6K5 1346 aa8.3□□□□□ -1.08
USP33-217ENST00000531637 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
USP33-217ENST00000531637 KLF4O43474 513 aa8.3□□□□□ -1.08
USP33-217ENST00000531637 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
USP33-217ENST00000531637 CLCQ05315 142 aa8.3□□□□□ -1.08
USP33-217ENST00000531637 PTPN11Q06124 597 aaPredicted RBP8.3□□□□□ -1.08
USP33-217ENST00000531637 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
USP33-217ENST00000531637 DMRTC2Q8IXT2 367 aaPredicted RBP8.3□□□□□ -1.08
USP33-217ENST00000531637 C19orf47Q8N9M1 422 aaKnown RBP8.3□□□□□ -1.08
USP33-217ENST00000531637 HNRNPLLQ8WVV9 542 aaKnown RBP8.3□□□□□ -1.08
USP33-217ENST00000531637 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
USP33-217ENST00000531637 LOC100289279A0A1B0GTE1 492 aa8.29□□□□□ -1.08
USP33-217ENST00000531637 TLDC2A0PJX2 215 aa8.29□□□□□ -1.08
USP33-217ENST00000531637 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
USP33-217ENST00000531637 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
USP33-217ENST00000531637 LSRQ86X29 649 aaPredicted RBP8.29□□□□□ -1.08
USP33-217ENST00000531637 PLPPR2Q96GM1 343 aa8.29□□□□□ -1.08
USP33-217ENST00000531637 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
USP33-217ENST00000531637 RAD18Q9NS91 495 aa8.29□□□□□ -1.08
USP33-217ENST00000531637 CDK11AQ9UQ88 783 aaPredicted RBP8.29□□□□□ -1.08
USP33-217ENST00000531637 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
USP33-217ENST00000531637 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 MEIS3P2A8K0S8 358 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 GFRA2O00451 464 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 GRIN3BO60391 1043 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 HTR3BO95264 441 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 DGKGP49619 791 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 FXNQ16595 210 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
USP33-217ENST00000531637 SRPK1Q96SB4 655 aaKnown RBP8.28□□□□□ -1.08
USP33-217ENST00000531637 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 ADAM30Q9UKF2 790 aa8.28□□□□□ -1.08
USP33-217ENST00000531637 ZNF862O60290 1169 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 ECEL1O95672 775 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 LIG1P18858 919 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 CASP7P55210 303 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 ZNF746Q6NUN9 644 aaPredicted RBP8.27□□□□□ -1.09
USP33-217ENST00000531637 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 TAB3Q8N5C8 712 aaPredicted RBP8.27□□□□□ -1.09
USP33-217ENST00000531637 GALNT11Q8NCW6 608 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 TMEM40Q8WWA1 233 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 PIF1Q9H611 641 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 GMIPQ9P107 970 aa8.27□□□□□ -1.09
USP33-217ENST00000531637 AOC2O75106 756 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 PLCG1P19174 1290 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 NCLP19338 710 aaKnown RBP8.26□□□□□ -1.09
USP33-217ENST00000531637 ID3Q02535 119 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 DUOXA2Q1HG44 320 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
USP33-217ENST00000531637 LYPD4Q6UWN0 246 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 ILDR2Q71H61 639 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 FBXO11Q86XK2 927 aa8.26□□□□□ -1.09
USP33-217ENST00000531637 PRAMEF27A3QJZ7 478 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 CLSTN1O94985 981 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 GUCY2CP25092 1073 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 ERVK-24P63145 666 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 INPP5AQ14642 412 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 DDR2Q16832 855 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 FOXD4L6Q3SYB3 417 aaPredicted RBP8.25□□□□□ -1.09
USP33-217ENST00000531637 ZC3H12AQ5D1E8 599 aaKnown RBP8.25□□□□□ -1.09
USP33-217ENST00000531637 TMEM201Q5SNT2 666 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 FOXD4L3Q6VB84 417 aaPredicted RBP8.25□□□□□ -1.09
USP33-217ENST00000531637 FMR1NBQ8N0W7 255 aaPredicted RBP8.25□□□□□ -1.09
USP33-217ENST00000531637 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 WDR18Q9BV38 432 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 CCDC113Q9H0I3 377 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 RNF208Q9H0X6 261 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 CYP4F12Q9HCS2 524 aa8.25□□□□□ -1.09
USP33-217ENST00000531637 DCDC2CA8MYV0 355 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 TM4SF5O14894 197 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 FANCGO15287 622 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 ADAM11O75078 769 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
USP33-217ENST00000531637 WFS1O76024 890 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 GMPRP36959 345 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 IFRD2Q12894 506 aaPredicted RBP8.24□□□□□ -1.09
USP33-217ENST00000531637 COL9A3Q14050 684 aaPredicted RBP8.24□□□□□ -1.09
USP33-217ENST00000531637 PPP2R5EQ16537 467 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 SDE2Q6IQ49 451 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 FAM169BQ8N8A8 192 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 RUSC1Q9BVN2 902 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 ATXN3LQ9H3M9 355 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 SNTG2Q9NY99 539 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 REV1Q9UBZ9 1251 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 TBX22Q9Y458 520 aa8.24□□□□□ -1.09
USP33-217ENST00000531637 A0A0A0MRY4 1105 aa8.23□□□□□ -1.09
USP33-217ENST00000531637 DLL1O00548 723 aa8.23□□□□□ -1.09
USP33-217ENST00000531637 GNB5O14775 395 aa8.23□□□□□ -1.09
USP33-217ENST00000531637 PGRP06401 933 aa8.23□□□□□ -1.09
USP33-217ENST00000531637 CTSBP07858 339 aa8.23□□□□□ -1.09
USP33-217ENST00000531637 CDK8P49336 464 aa8.23□□□□□ -1.09
USP33-217ENST00000531637 ETF1P62495 437 aaKnown RBP8.23□□□□□ -1.09
USP33-217ENST00000531637 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms