RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 A0A0G2JLL6 359 aaPredicted RBP23.67■■□□□ 1.38
UBXN1-212ENST00000531625 CCL5P13501 91 aa23.67■■□□□ 1.38
UBXN1-212ENST00000531625 RGS3P49796 1198 aa23.67■■□□□ 1.38
UBXN1-212ENST00000531625 FCGRTP55899 365 aa23.67■■□□□ 1.38
UBXN1-212ENST00000531625 PRRT2Q7Z6L0 340 aaPredicted RBP23.67■■□□□ 1.38
UBXN1-212ENST00000531625 SCYL3Q8IZE3 742 aa23.67■■□□□ 1.38
UBXN1-212ENST00000531625 CYP2C8P10632 490 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 PTPRAP18433 802 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 UBXN2AP68543 259 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 PICK1Q9NRD5 415 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 SMC4Q9NTJ3 1288 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 HDAC5Q9UQL6 1122 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 SLC45A1Q9Y2W3 748 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 ZHX2Q9Y6X8 837 aa23.66■■□□□ 1.38
UBXN1-212ENST00000531625 RFX7Q2KHR2 1363 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 MYH2Q9UKX2 1941 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 PRKCZQ05513 592 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 SLAIN1Q8ND83 568 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 FAM163AQ96GL9 167 aaPredicted RBP23.65■■□□□ 1.38
UBXN1-212ENST00000531625 RNF208Q9H0X6 261 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 BIN2Q9UBW5 565 aaPredicted RBP23.65■■□□□ 1.38
UBXN1-212ENST00000531625 AFG3L2Q9Y4W6 797 aa23.65■■□□□ 1.38
UBXN1-212ENST00000531625 PDS5AQ29RF7 1337 aaKnown RBP23.64■■□□□ 1.38
UBXN1-212ENST00000531625 CCDC102BQ68D86 513 aa23.64■■□□□ 1.37
UBXN1-212ENST00000531625 SH3BP5LQ7L8J4 393 aa23.64■■□□□ 1.37
UBXN1-212ENST00000531625 SLF2Q8IX21 1173 aa23.64■■□□□ 1.37
UBXN1-212ENST00000531625 DPF3Q92784 378 aa23.64■■□□□ 1.37
UBXN1-212ENST00000531625 HTATIP2Q9BUP3 242 aa23.64■■□□□ 1.37
UBXN1-212ENST00000531625 DOCK2Q92608 1830 aa23.63■■□□□ 1.37
UBXN1-212ENST00000531625 MGAMO43451 1857 aa23.63■■□□□ 1.37
UBXN1-212ENST00000531625 CTNND1O60716 968 aaKnown RBP23.62■■□□□ 1.37
UBXN1-212ENST00000531625 ADORA1P30542 326 aa23.62■■□□□ 1.37
UBXN1-212ENST00000531625 RASGRF1Q13972 1273 aa23.62■■□□□ 1.37
UBXN1-212ENST00000531625 CHRDL2Q6WN34 429 aa23.62■■□□□ 1.37
UBXN1-212ENST00000531625 TRMT2AQ8IZ69 625 aaKnown RBP23.62■■□□□ 1.37
UBXN1-212ENST00000531625 PA2G4Q9UQ80 394 aaKnown RBP23.62■■□□□ 1.37
UBXN1-212ENST00000531625 LRRFIP2Q9Y608 721 aaKnown RBP23.62■■□□□ 1.37
UBXN1-212ENST00000531625 DDTLA6NHG4 134 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-212ENST00000531625 CT47B1P0C2W7 299 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-212ENST00000531625 CAPN2P17655 700 aa23.61■■□□□ 1.37
UBXN1-212ENST00000531625 SPTY2D1Q68D10 685 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-212ENST00000531625 DZIP1Q86YF9 867 aaKnown RBP23.61■■□□□ 1.37
UBXN1-212ENST00000531625 ZSCAN29Q8IWY8 852 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-212ENST00000531625 U2AF1L4Q8WU68 220 aaKnown RBP23.61■■□□□ 1.37
UBXN1-212ENST00000531625 GABRQQ9UN88 632 aa23.61■■□□□ 1.37
UBXN1-212ENST00000531625 GADL1Q6ZQY3 521 aa23.6■■□□□ 1.37
UBXN1-212ENST00000531625 API5Q9BZZ5 524 aaKnown RBP23.6■■□□□ 1.37
UBXN1-212ENST00000531625 DDX4Q9NQI0 724 aaKnown RBP23.6■■□□□ 1.37
UBXN1-212ENST00000531625 PTPRFP10586 1907 aa23.6■■□□□ 1.37
UBXN1-212ENST00000531625 ADCY3O60266 1144 aa23.59■■□□□ 1.37
UBXN1-212ENST00000531625 FLT3LGP49771 235 aa23.59■■□□□ 1.37
UBXN1-212ENST00000531625 IRF5Q13568 498 aa23.59■■□□□ 1.37
UBXN1-212ENST00000531625 PXYLP1Q8TE99 480 aa23.59■■□□□ 1.37
UBXN1-212ENST00000531625 UNC93B1Q9H1C4 597 aa23.59■■□□□ 1.37
UBXN1-212ENST00000531625 ABCF2Q9UG63 623 aa23.59■■□□□ 1.37
UBXN1-212ENST00000531625 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
UBXN1-212ENST00000531625 TBC1D12O60347 775 aa23.58■■□□□ 1.37
UBXN1-212ENST00000531625 NPM3O75607 178 aaKnown RBP23.58■■□□□ 1.37
UBXN1-212ENST00000531625 SGPL1O95470 568 aa23.58■■□□□ 1.37
UBXN1-212ENST00000531625 BTDP43251 543 aa23.58■■□□□ 1.37
UBXN1-212ENST00000531625 TIMM10P62072 90 aa23.58■■□□□ 1.37
UBXN1-212ENST00000531625 RBM27Q9P2N5 1060 aaKnown RBP23.58■■□□□ 1.37
UBXN1-212ENST00000531625 NR2E3Q9Y5X4 410 aa23.58■■□□□ 1.37
UBXN1-212ENST00000531625 MROH7-TTC4A0A0A0MT08 1334 aa23.58■■□□□ 1.36
UBXN1-212ENST00000531625 PHIPQ8WWQ0 1821 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 GPR75-ASB3A0A0A6YYF3 556 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 FARP2O94887 1054 aaPredicted RBP23.57■■□□□ 1.36
UBXN1-212ENST00000531625 SMCR8Q8TEV9 937 aaPredicted RBP23.57■■□□□ 1.36
UBXN1-212ENST00000531625 PRO3102Q9H379 93 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 AGTPBP1Q9UPW5 1226 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 AKAP2Q9Y2D5 859 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 DOCK1Q14185 1865 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 DOCK3Q8IZD9 2030 aa23.57■■□□□ 1.36
UBXN1-212ENST00000531625 TNPO2O14787 897 aaKnown RBP23.56■■□□□ 1.36
UBXN1-212ENST00000531625 SLURP2P0DP57 97 aa23.56■■□□□ 1.36
UBXN1-212ENST00000531625 RHBDL3P58872 404 aa23.56■■□□□ 1.36
UBXN1-212ENST00000531625 PICALMQ13492 652 aa23.56■■□□□ 1.36
UBXN1-212ENST00000531625 MVPQ14764 893 aaKnown RBP23.56■■□□□ 1.36
UBXN1-212ENST00000531625 MEIS3Q99687 375 aa23.56■■□□□ 1.36
UBXN1-212ENST00000531625 A0A1B0GUL7 405 aa23.55■■□□□ 1.36
UBXN1-212ENST00000531625 TRIM75PA6NK02 468 aa23.55■■□□□ 1.36
UBXN1-212ENST00000531625 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
UBXN1-212ENST00000531625 INHAP05111 366 aa23.55■■□□□ 1.36
UBXN1-212ENST00000531625 MECOMQ03112 1051 aa23.55■■□□□ 1.36
UBXN1-212ENST00000531625 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
UBXN1-212ENST00000531625 XAGE2Q96GT9 111 aa23.55■■□□□ 1.36
UBXN1-212ENST00000531625 ELNP15502 786 aa23.54■■□□□ 1.36
UBXN1-212ENST00000531625 ZNF384Q8TF68 577 aa23.54■■□□□ 1.36
UBXN1-212ENST00000531625 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
UBXN1-212ENST00000531625 TFCP2Q12800 502 aa23.53■■□□□ 1.36
UBXN1-212ENST00000531625 MTX1Q13505 466 aa23.53■■□□□ 1.36
UBXN1-212ENST00000531625 FAM110CQ1W6H9 321 aa23.53■■□□□ 1.36
UBXN1-212ENST00000531625 PROCA1Q8NCQ7 364 aaPredicted RBP23.53■■□□□ 1.36
UBXN1-212ENST00000531625 COA7Q96BR5 231 aa23.53■■□□□ 1.36
UBXN1-212ENST00000531625 OSBPL5Q9H0X9 879 aaPredicted RBP23.53■■□□□ 1.36
UBXN1-212ENST00000531625 PAK6Q9NQU5 681 aaPredicted RBP23.53■■□□□ 1.36
UBXN1-212ENST00000531625 PNMA3Q9UL41 463 aa23.53■■□□□ 1.36
UBXN1-212ENST00000531625 LAMA3Q16787 3333 aa23.53■■□□□ 1.36
UBXN1-212ENST00000531625 COL2A1P02458 1487 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms