RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ADGRA2Q96PE1 1338 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 RFX7Q2KHR2 1363 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 DDTLA6NHG4 134 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 CTGFP29279 349 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 PSMC4P43686 418 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 MECOMQ03112 1051 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 SCYL3Q8IZE3 742 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 ZNF384Q8TF68 577 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 TRIM47Q96LD4 638 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 PICK1Q9NRD5 415 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 HMG20BQ9P0W2 317 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 ZHX2Q9Y6X8 837 aa15.83■□□□□ 0.12
TM9SF1-211ENST00000531406 GPR75-ASB3A0A0A6YYF3 556 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 MYCP01106 439 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 PTPRAP18433 802 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 RHBDL3P58872 404 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 PICALMQ13492 652 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 SLC4A8Q2Y0W8 1093 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 GORABQ5T7V8 394 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 CLUAP1Q96AJ1 413 aa15.82■□□□□ 0.12
TM9SF1-211ENST00000531406 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 G3BP1Q13283 466 aaKnown RBP eCLIP15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 PI16Q6UXB8 463 aa15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 TBC1D9Q6ZT07 1266 aa15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 SPATA5Q8NB90 893 aa15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 PARK7Q99497 189 aaKnown RBP15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 SRRDQ9UH36 339 aa15.81■□□□□ 0.12
TM9SF1-211ENST00000531406 A0A0G2JLL6 359 aaPredicted RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 CTNND1O60716 968 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 FMNL1O95466 1100 aaPredicted RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 LDHCP07864 332 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 CYP2C8P10632 490 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 BCRP11274 1271 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 OSBPP22059 807 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 HOXD10P28358 340 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 GSTO1P78417 241 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 FASTKD5Q7L8L6 764 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 PRRT2Q7Z6L0 340 aaPredicted RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 NSUN4Q96CB9 384 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 GCC1Q96CN9 775 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 AFG3L2Q9Y4W6 797 aa15.8■□□□□ 0.12
TM9SF1-211ENST00000531406 MAP4K4O95819 1239 aaPredicted RBP15.79■□□□□ 0.12
TM9SF1-211ENST00000531406 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
TM9SF1-211ENST00000531406 GADL1Q6ZQY3 521 aa15.79■□□□□ 0.12
TM9SF1-211ENST00000531406 PCDH10Q9P2E7 1040 aa15.79■□□□□ 0.12
TM9SF1-211ENST00000531406 TBC1D12O60347 775 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 RAET1EQ8TD07 263 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 RAI14Q9P0K7 980 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 SLC45A1Q9Y2W3 748 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 MYH13Q9UKX3 1938 aa15.78■□□□□ 0.12
TM9SF1-211ENST00000531406 MYPNQ86TC9 1320 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 CENPFP49454 3210 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 GRK4P32298 578 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 MCAMP43121 646 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 POLA2Q14181 598 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 MTFR1Q15390 333 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 ZKSCAN2Q63HK3 967 aa15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
TM9SF1-211ENST00000531406 RBBP6Q7Z6E9 1792 aaKnown RBP15.77■□□□□ 0.11
TM9SF1-211ENST00000531406 TRIM75PA6NK02 468 aa15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 FAM196BA6NMK8 535 aa15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 FCGRTP55899 365 aa15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 PRKCZQ05513 592 aa15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 CCDC84Q86UT8 332 aaPredicted RBP15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 GPR108Q9NPR9 543 aa15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 LRP2BPQ9P2M1 347 aa15.76■□□□□ 0.11
TM9SF1-211ENST00000531406 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 HABP4Q5JVS0 413 aaKnown RBP15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 SSH3Q8TE77 659 aa15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 OSBPL5Q9H0X9 879 aaPredicted RBP15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 SNRKQ9NRH2 765 aa15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 ZSWIM8A7E2V4 1837 aa15.75■□□□□ 0.11
TM9SF1-211ENST00000531406 COL2A1P02458 1487 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 ATP8B2P98198 1209 aa15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 OS9Q13438 667 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 SH3RF3Q8TEJ3 882 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 SHISA4Q96DD7 197 aa15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 MKI67P46013 3256 aaKnown RBP15.74■□□□□ 0.11
TM9SF1-211ENST00000531406 CCL5P13501 91 aa15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 SPP2Q13103 211 aa15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 CCDC158Q5M9N0 1113 aa15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 TREML2Q5T2D2 321 aa15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 NOL10Q9BSC4 688 aaKnown RBP15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 GABRQQ9UN88 632 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms