RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 TEX11Q8IYF3 940 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 ANKRD13AQ8IZ07 590 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.8■■□□□ 1.24
GMDS-208ENST00000530927 ZKSCAN4Q969J2 545 aaPredicted RBP22.8■■□□□ 1.24
GMDS-208ENST00000530927 WNK4Q96J92 1243 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 WRNIP1Q96S55 665 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 CDK5RAP2Q96SN8 1893 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 ENTPD3O75355 529 aa22.79■■□□□ 1.24
GMDS-208ENST00000530927 LBX1P52954 281 aa22.79■■□□□ 1.24
GMDS-208ENST00000530927 ZSCAN29Q8IWY8 852 aaPredicted RBP22.79■■□□□ 1.24
GMDS-208ENST00000530927 INPP5BP32019 993 aa22.78■■□□□ 1.24
GMDS-208ENST00000530927 PAG1Q9NWQ8 432 aa22.78■■□□□ 1.24
GMDS-208ENST00000530927 MAP3K9P80192 1104 aa22.77■■□□□ 1.24
GMDS-208ENST00000530927 MAP3K12Q12852 859 aa22.77■■□□□ 1.24
GMDS-208ENST00000530927 HAUS7Q99871 368 aa22.77■■□□□ 1.24
GMDS-208ENST00000530927 NOL10Q9BSC4 688 aaKnown RBP22.77■■□□□ 1.24
GMDS-208ENST00000530927 BEGAINQ9BUH8 593 aa22.77■■□□□ 1.24
GMDS-208ENST00000530927 FAM196BA6NMK8 535 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 IGHDP01880 384 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 PDE6AP16499 860 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 CTCFP49711 727 aaPredicted RBP22.76■■□□□ 1.23
GMDS-208ENST00000530927 PPP4CP60510 307 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 HDAC1Q13547 482 aaPredicted RBP22.76■■□□□ 1.23
GMDS-208ENST00000530927 MAPKAPK5Q8IW41 473 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 TGFBRAP1Q8WUH2 860 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 OPTNQ96CV9 577 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 ECHDC1Q9NTX5 307 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 SNCAIPQ9Y6H5 919 aa22.76■■□□□ 1.23
GMDS-208ENST00000530927 SLC9C2Q5TAH2 1124 aa22.75■■□□□ 1.23
GMDS-208ENST00000530927 ANKRD45Q5TZF3 282 aa22.75■■□□□ 1.23
GMDS-208ENST00000530927 ZNF341Q9BYN7 854 aa22.75■■□□□ 1.23
GMDS-208ENST00000530927 OSBPL5Q9H0X9 879 aaPredicted RBP22.75■■□□□ 1.23
GMDS-208ENST00000530927 RNF186Q9NXI6 227 aa22.75■■□□□ 1.23
GMDS-208ENST00000530927 FOCADQ5VW36 1801 aa22.75■■□□□ 1.23
GMDS-208ENST00000530927 TRPA1O75762 1119 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 BAG3O95817 575 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 TTF1Q15361 905 aaPredicted RBP22.74■■□□□ 1.23
GMDS-208ENST00000530927 SLC4A8Q2Y0W8 1093 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 DCAF15Q66K64 600 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 SIPA1L1O43166 1804 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 FLT1P17948 1338 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 ZNF532Q9HCE3 1301 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 TCRBV5S4A2TA0A5A2 114 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 MAP4K4O95819 1239 aaPredicted RBP22.74■■□□□ 1.23
GMDS-208ENST00000530927 OTUD5Q96G74 571 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 CSADQ9Y600 493 aa22.74■■□□□ 1.23
GMDS-208ENST00000530927 HOOK2Q96ED9 719 aa22.73■■□□□ 1.23
GMDS-208ENST00000530927 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.73■■□□□ 1.23
GMDS-208ENST00000530927 SAP30BPQ9UHR5 308 aaKnown RBP22.73■■□□□ 1.23
GMDS-208ENST00000530927 ZNF112Q9UJU3 913 aa22.73■■□□□ 1.23
GMDS-208ENST00000530927 PHF20L1A8MW92 1017 aa22.72■■□□□ 1.23
GMDS-208ENST00000530927 RIOK1Q9BRS2 568 aaKnown RBP22.72■■□□□ 1.23
GMDS-208ENST00000530927 LAMB1P07942 1786 aa22.71■■□□□ 1.23
GMDS-208ENST00000530927 UNCXA6NJT0 531 aa22.71■■□□□ 1.23
GMDS-208ENST00000530927 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
GMDS-208ENST00000530927 ZBTB48P10074 688 aaPredicted RBP22.71■■□□□ 1.23
GMDS-208ENST00000530927 TM4SF4P48230 202 aa22.71■■□□□ 1.23
GMDS-208ENST00000530927 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
GMDS-208ENST00000530927 SALL3Q9BXA9 1300 aa22.7■■□□□ 1.23
GMDS-208ENST00000530927 SPDYE5A6NIY4 337 aa22.7■■□□□ 1.22
GMDS-208ENST00000530927 PLCG2P16885 1265 aa22.7■■□□□ 1.22
GMDS-208ENST00000530927 PI4K2BQ8TCG2 481 aa22.7■■□□□ 1.22
GMDS-208ENST00000530927 GCC1Q96CN9 775 aa22.7■■□□□ 1.22
GMDS-208ENST00000530927 PALD1Q9ULE6 856 aa22.7■■□□□ 1.22
GMDS-208ENST00000530927 MYH7P12883 1935 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 MAGEB6P1A0A0J9YX57 407 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 IGF2BP3O00425 579 aaKnown RBP eCLIP22.69■■□□□ 1.22
GMDS-208ENST00000530927 TBC1D8O95759 1140 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 ADD2P35612 726 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 AAMPQ13685 434 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 RRP1BQ14684 758 aaKnown RBP22.69■■□□□ 1.22
GMDS-208ENST00000530927 LCORLQ8N3X6 602 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 MS4A4AQ96JQ5 239 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 PTPN18Q99952 460 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 R3HDMLQ9H3Y0 253 aa22.69■■□□□ 1.22
GMDS-208ENST00000530927 COL2A1P02458 1487 aaPredicted RBP22.68■■□□□ 1.22
GMDS-208ENST00000530927 IGSF3O75054 1194 aa22.68■■□□□ 1.22
GMDS-208ENST00000530927 MAP3K10Q02779 954 aa22.68■■□□□ 1.22
GMDS-208ENST00000530927 CCDC84Q86UT8 332 aaPredicted RBP22.68■■□□□ 1.22
GMDS-208ENST00000530927 GPATCH3Q96I76 525 aa22.68■■□□□ 1.22
GMDS-208ENST00000530927 LNPKQ9C0E8 428 aa22.68■■□□□ 1.22
GMDS-208ENST00000530927 MANSC4A6NHS7 340 aaPredicted RBP22.67■■□□□ 1.22
GMDS-208ENST00000530927 IRF6O14896 467 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 CA12O43570 354 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 MX1P20591 662 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 USP5P45974 858 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 EVX2Q03828 476 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 SREBF2Q12772 1141 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 ERO1BQ86YB8 467 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 RWDD1Q9H446 243 aaPredicted RBP22.67■■□□□ 1.22
GMDS-208ENST00000530927 ARMT1Q9H993 441 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
GMDS-208ENST00000530927 SHROOM1Q2M3G4 852 aaPredicted RBP22.66■■□□□ 1.22
GMDS-208ENST00000530927 IFNL1Q8IU54 200 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 SMC5Q8IY18 1101 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 SDR42E1Q8WUS8 393 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 BRI3BPQ8WY22 251 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 DNAJC18Q9H819 358 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.66■■□□□ 1.222e-7■■■■■ 29.3
GMDS-208ENST00000530927 SAGE1Q9NXZ1 904 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms