RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FCGRTP55899 365 aa11.31□□□□□ -0.6
VPS11-203ENST00000529545 GRIK5Q16478 980 aa11.31□□□□□ -0.6
VPS11-203ENST00000529545 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
VPS11-203ENST00000529545 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
VPS11-203ENST00000529545 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
VPS11-203ENST00000529545 AK9Q5TCS8 1911 aa11.31□□□□□ -0.6
VPS11-203ENST00000529545 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
VPS11-203ENST00000529545 CAPN2P17655 700 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 INPP5BP32019 993 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
VPS11-203ENST00000529545 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
VPS11-203ENST00000529545 WDR63Q8IWG1 891 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 FAM151AQ8WW52 585 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
VPS11-203ENST00000529545 DLL1O00548 723 aa11.29□□□□□ -0.6
VPS11-203ENST00000529545 PDE8BO95263 885 aa11.29□□□□□ -0.6
VPS11-203ENST00000529545 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
VPS11-203ENST00000529545 CTGFP29279 349 aa11.29□□□□□ -0.6
VPS11-203ENST00000529545 BCAMP50895 628 aa11.29□□□□□ -0.6
VPS11-203ENST00000529545 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
VPS11-203ENST00000529545 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
VPS11-203ENST00000529545 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
VPS11-203ENST00000529545 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
VPS11-203ENST00000529545 A0A1W2PPC1 479 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 CXCL11O14625 94 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
VPS11-203ENST00000529545 EVI5O60447 810 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 SGPL1O95470 568 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 PRKCZQ05513 592 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 TCP10Q12799 353 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
VPS11-203ENST00000529545 UBE2Q1Q7Z7E8 422 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
VPS11-203ENST00000529545 MGAMO43451 1857 aa11.27□□□□□ -0.6
VPS11-203ENST00000529545 ADCY3O60266 1144 aa11.27□□□□□ -0.61
VPS11-203ENST00000529545 TFRCP02786 760 aaKnown RBP11.27□□□□□ -0.61
VPS11-203ENST00000529545 NBPF7P0C2Y1 421 aaPredicted RBP11.27□□□□□ -0.61
VPS11-203ENST00000529545 BCRP11274 1271 aa11.27□□□□□ -0.61
VPS11-203ENST00000529545 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
VPS11-203ENST00000529545 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
VPS11-203ENST00000529545 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.61
VPS11-203ENST00000529545 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
VPS11-203ENST00000529545 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
VPS11-203ENST00000529545 PICK1Q9NRD5 415 aa11.27□□□□□ -0.61
VPS11-203ENST00000529545 KIF16BQ96L93 1317 aa11.27□□□□□ -0.61
VPS11-203ENST00000529545 BRCA2P51587 3418 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.26□□□□□ -0.61
VPS11-203ENST00000529545 CYP2C8P10632 490 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 SLC5A1P13866 664 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
VPS11-203ENST00000529545 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
VPS11-203ENST00000529545 PRO3102Q9H379 93 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 ZHX2Q9Y6X8 837 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
VPS11-203ENST00000529545 TNPO2O14787 897 aaKnown RBP11.25□□□□□ -0.61
VPS11-203ENST00000529545 INHAP05111 366 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 FLT3LGP49771 235 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 MOGSQ13724 837 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 GADL1Q6ZQY3 521 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
VPS11-203ENST00000529545 DEFB118Q96PH6 123 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 USP40Q9NVE5 1235 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 GNL3LQ9NVN8 582 aaKnown RBP11.25□□□□□ -0.61
VPS11-203ENST00000529545 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 DAGLAQ9Y4D2 1042 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 UTYO14607 1347 aa11.25□□□□□ -0.61
VPS11-203ENST00000529545 LDHBP07195 334 aaKnown RBP11.24□□□□□ -0.61
VPS11-203ENST00000529545 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
VPS11-203ENST00000529545 SCYL3Q8IZE3 742 aa11.24□□□□□ -0.61
VPS11-203ENST00000529545 LPIN2Q92539 896 aa11.24□□□□□ -0.61
VPS11-203ENST00000529545 COA7Q96BR5 231 aa11.24□□□□□ -0.61
VPS11-203ENST00000529545 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
VPS11-203ENST00000529545 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
VPS11-203ENST00000529545 A0A0G2JLL6 359 aaPredicted RBP11.23□□□□□ -0.61
VPS11-203ENST00000529545 ELNP15502 786 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 FGFR2P21802 821 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 NFIAQ12857 509 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 IRF5Q13568 498 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 NECAB2Q7Z6G3 386 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 PRRT2Q7Z6L0 340 aaPredicted RBP11.23□□□□□ -0.61
VPS11-203ENST00000529545 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
VPS11-203ENST00000529545 ANKRD44Q8N8A2 993 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 FAM198AQ9UFP1 575 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 STAP2Q9UGK3 403 aa11.23□□□□□ -0.61
VPS11-203ENST00000529545 EYA2O00167 538 aa11.22□□□□□ -0.61
VPS11-203ENST00000529545 ENTPD3O75355 529 aa11.22□□□□□ -0.61
VPS11-203ENST00000529545 PTPRAP18433 802 aa11.22□□□□□ -0.61
VPS11-203ENST00000529545 PAWRQ96IZ0 340 aaKnown RBP11.22□□□□□ -0.61
VPS11-203ENST00000529545 DOCK2Q92608 1830 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms