RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 RAET1EQ8TD07 263 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 ATXN2LQ8WWM7 1075 aaKnown RBP10.81□□□□□ -0.68
SSBP3-212ENST00000528930 FAM89AQ96GI7 184 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 UHRF1Q96T88 793 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-212ENST00000528930 EYA3Q99504 573 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 MYD88Q99836 296 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 METTL22Q9BUU2 404 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-212ENST00000528930 STK31Q9BXU1 1019 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 TTYH1Q9H313 450 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-212ENST00000528930 PAK6Q9NQU5 681 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-212ENST00000528930 PI4KAP2A4QPH2 592 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 DDX58O95786 925 aaKnown RBP10.8□□□□□ -0.68
SSBP3-212ENST00000528930 KSR2Q6VAB6 950 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
SSBP3-212ENST00000528930 PI4KAP1Q8N8J0 262 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 EPAS1Q99814 870 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 MYH16Q9H6N6 1097 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-212ENST00000528930 NSFL1CQ9UNZ2 370 aaKnown RBP10.8□□□□□ -0.68
SSBP3-212ENST00000528930 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 MYPNQ86TC9 1320 aa10.8□□□□□ -0.68
SSBP3-212ENST00000528930 ARAP2Q8WZ64 1704 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 PPP1R12BO60237 982 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-212ENST00000528930 IGKV5-2P06315 115 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 GPSM2P81274 684 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 SF3B3Q15393 1217 aaKnown RBP10.79□□□□□ -0.68
SSBP3-212ENST00000528930 NYAP1Q6ZVC0 841 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 ANKLE1Q8NAG6 615 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 TBC1D16Q8TBP0 767 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 ASB2Q96Q27 587 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 ZCCHC17Q9NP64 241 aaKnown RBP10.79□□□□□ -0.68
SSBP3-212ENST00000528930 TSR3Q9UJK0 312 aaKnown RBP10.79□□□□□ -0.68
SSBP3-212ENST00000528930 CACNA1FO60840 1977 aa10.79□□□□□ -0.68
SSBP3-212ENST00000528930 IRS4O14654 1257 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-212ENST00000528930 TFRCP02786 760 aaKnown RBP10.78□□□□□ -0.68
SSBP3-212ENST00000528930 HOXD10P28358 340 aa10.78□□□□□ -0.68
SSBP3-212ENST00000528930 FLIIQ13045 1269 aa10.78□□□□□ -0.68
SSBP3-212ENST00000528930 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-212ENST00000528930 DIEXFQ68CQ4 756 aaKnown RBP10.78□□□□□ -0.68
SSBP3-212ENST00000528930 ZBTB38Q8NAP3 1195 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-212ENST00000528930 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-212ENST00000528930 DEFB118Q96PH6 123 aa10.78□□□□□ -0.68
SSBP3-212ENST00000528930 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.68
SSBP3-212ENST00000528930 CCL15-CCL14A0A0B4J2E2 113 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 SASH1O94885 1247 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 PCCAP05165 728 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-212ENST00000528930 PSMC4P43686 418 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 SLFN5Q08AF3 891 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 CCL15Q16663 113 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 ANKRD13AQ8IZ07 590 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-212ENST00000528930 OPTNQ96CV9 577 aa10.77□□□□□ -0.69
SSBP3-212ENST00000528930 ZBED3Q96IU2 234 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-212ENST00000528930 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-212ENST00000528930 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-212ENST00000528930 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-212ENST00000528930 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 E9PSI1 815 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
SSBP3-212ENST00000528930 CWF19L2Q2TBE0 894 aaKnown RBP10.76□□□□□ -0.69
SSBP3-212ENST00000528930 C17orf99Q6UX52 265 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 TRMT2AQ8IZ69 625 aaKnown RBP10.76□□□□□ -0.69
SSBP3-212ENST00000528930 CELF1Q92879 486 aaKnown RBP10.76□□□□□ -0.69
SSBP3-212ENST00000528930 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 ZC3H12CQ9C0D7 883 aaKnown RBP10.76□□□□□ -0.69
SSBP3-212ENST00000528930 THEGQ9P2T0 379 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 PPP2R3BQ9Y5P8 575 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 AK9Q5TCS8 1911 aa10.76□□□□□ -0.69
SSBP3-212ENST00000528930 PDE8AO60658 829 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 IREB2P48200 963 aaKnown RBP10.75□□□□□ -0.69
SSBP3-212ENST00000528930 GTF2A2P52657 109 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-212ENST00000528930 PRKCZQ05513 592 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 FKBP5Q13451 457 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-212ENST00000528930 DNAAF4Q8WXU2 420 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 DEFB129Q9H1M3 183 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 PODXL2Q9NZ53 605 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 ZDBF2Q9HCK1 2354 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 MYO9BQ13459 2157 aa10.75□□□□□ -0.69
SSBP3-212ENST00000528930 USP17L3A6NCW0 530 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 USP17L4A6NCW7 530 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 H7C1W4 665 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 SMAPO00193 183 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 LCE2BO14633 110 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 USP2O75604 605 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-212ENST00000528930 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-212ENST00000528930 INHAP05111 366 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 MMP14P50281 582 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 FOXK2Q01167 660 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 NEXNQ0ZGT2 675 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 TMEM31Q5JXX7 168 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 USP17L1Q7RTZ2 530 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 SEC31BQ9NQW1 1179 aa10.74□□□□□ -0.69
SSBP3-212ENST00000528930 F6X3S4 739 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 CASP7P55210 303 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 MRPS5P82675 430 aaKnown RBP10.73□□□□□ -0.69
SSBP3-212ENST00000528930 SMAD3P84022 425 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms