RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 PDHXO00330 501 aa31.92■■■□□ 2.7
TRIM3-206ENST00000528227 MAP3K10Q02779 954 aa31.92■■■□□ 2.7
TRIM3-206ENST00000528227 G3BP1Q13283 466 aaKnown RBP eCLIP31.92■■■□□ 2.7
TRIM3-206ENST00000528227 KIF22Q14807 665 aa31.92■■■□□ 2.7
TRIM3-206ENST00000528227 ZKSCAN2Q63HK3 967 aa31.92■■■□□ 2.7
TRIM3-206ENST00000528227 PI16Q6UXB8 463 aa31.92■■■□□ 2.7
TRIM3-206ENST00000528227 ZSCAN29Q8IWY8 852 aaPredicted RBP31.92■■■□□ 2.7
TRIM3-206ENST00000528227 SPATA5Q8NB90 893 aa31.92■■■□□ 2.7
TRIM3-206ENST00000528227 GPR75-ASB3A0A0A6YYF3 556 aa31.91■■■□□ 2.7
TRIM3-206ENST00000528227 DDTLA6NHG4 134 aaPredicted RBP31.91■■■□□ 2.7
TRIM3-206ENST00000528227 ARID4AP29374 1257 aaPredicted RBP31.91■■■□□ 2.7
TRIM3-206ENST00000528227 SLC9C1Q4G0N8 1177 aa31.91■■■□□ 2.7
TRIM3-206ENST00000528227 GORABQ5T7V8 394 aa31.91■■■□□ 2.7
TRIM3-206ENST00000528227 CXCL11O14625 94 aa31.9■■■□□ 2.7
TRIM3-206ENST00000528227 PICALMQ13492 652 aa31.9■■■□□ 2.7
TRIM3-206ENST00000528227 SCYL3Q8IZE3 742 aa31.9■■■□□ 2.7
TRIM3-206ENST00000528227 CPA4Q9UI42 421 aa31.9■■■□□ 2.7
TRIM3-206ENST00000528227 ADGRA2Q96PE1 1338 aa31.9■■■□□ 2.7
TRIM3-206ENST00000528227 GNRH1P01148 92 aa31.89■■■□□ 2.7
TRIM3-206ENST00000528227 RHBDL3P58872 404 aa31.89■■■□□ 2.7
TRIM3-206ENST00000528227 NBPF11Q86T75 865 aa31.89■■■□□ 2.7
TRIM3-206ENST00000528227 TBC1D9Q6ZT07 1266 aa31.88■■■□□ 2.69
TRIM3-206ENST00000528227 NSUN4Q96CB9 384 aaKnown RBP31.88■■■□□ 2.69
TRIM3-206ENST00000528227 PICK1Q9NRD5 415 aa31.88■■■□□ 2.69
TRIM3-206ENST00000528227 SLURP2P0DP57 97 aa31.87■■■□□ 2.69
TRIM3-206ENST00000528227 PTPRAP18433 802 aa31.87■■■□□ 2.69
TRIM3-206ENST00000528227 EN2P19622 333 aaPredicted RBP31.87■■■□□ 2.69
TRIM3-206ENST00000528227 POLA2Q14181 598 aa31.87■■■□□ 2.69
TRIM3-206ENST00000528227 GPAT2Q6NUI2 795 aa31.87■■■□□ 2.69
TRIM3-206ENST00000528227 ZHX2Q9Y6X8 837 aa31.87■■■□□ 2.69
TRIM3-206ENST00000528227 DOCK1Q14185 1865 aa31.86■■■□□ 2.69
TRIM3-206ENST00000528227 NPM3O75607 178 aaKnown RBP31.86■■■□□ 2.69
TRIM3-206ENST00000528227 MCAMP43121 646 aa31.86■■■□□ 2.69
TRIM3-206ENST00000528227 GSTO1P78417 241 aa31.86■■■□□ 2.69
TRIM3-206ENST00000528227 TMEM106CQ9BVX2 250 aa31.86■■■□□ 2.69
TRIM3-206ENST00000528227 LDHCP07864 332 aa31.85■■■□□ 2.69
TRIM3-206ENST00000528227 CTGFP29279 349 aa31.85■■■□□ 2.69
TRIM3-206ENST00000528227 HNRNPUQ00839 825 aaKnown RBP eCLIP31.85■■■□□ 2.69
TRIM3-206ENST00000528227 A0A0G2JLL6 359 aaPredicted RBP31.84■■■□□ 2.69
TRIM3-206ENST00000528227 CTNND1O60716 968 aaKnown RBP31.84■■■□□ 2.69
TRIM3-206ENST00000528227 UQCRFS1P1P0C7P4 283 aa31.84■■■□□ 2.69
TRIM3-206ENST00000528227 PRMT2P55345 433 aa31.84■■■□□ 2.69
TRIM3-206ENST00000528227 PRRT2Q7Z6L0 340 aaPredicted RBP31.84■■■□□ 2.69
TRIM3-206ENST00000528227 PARK7Q99497 189 aaKnown RBP31.84■■■□□ 2.69
TRIM3-206ENST00000528227 RAI14Q9P0K7 980 aa31.84■■■□□ 2.69
TRIM3-206ENST00000528227 AFG3L2Q9Y4W6 797 aa31.84■■■□□ 2.69
TRIM3-206ENST00000528227 ECM2O94769 699 aaPredicted RBP31.83■■■□□ 2.69
TRIM3-206ENST00000528227 MAP4K4O95819 1239 aaPredicted RBP31.83■■■□□ 2.69
TRIM3-206ENST00000528227 SSH3Q8TE77 659 aa31.83■■■□□ 2.69
TRIM3-206ENST00000528227 SH3TC2Q8TF17 1288 aa31.83■■■□□ 2.69
TRIM3-206ENST00000528227 GPR108Q9NPR9 543 aa31.83■■■□□ 2.69
TRIM3-206ENST00000528227 PHIPQ8WWQ0 1821 aa31.83■■■□□ 2.69
TRIM3-206ENST00000528227 KIAA0100Q14667 2235 aaKnown RBP31.83■■■□□ 2.69
TRIM3-206ENST00000528227 BRCA2P51587 3418 aa31.82■■■□□ 2.69
TRIM3-206ENST00000528227 PSMC4P43686 418 aa31.82■■■□□ 2.68
TRIM3-206ENST00000528227 ATP8B2P98198 1209 aa31.82■■■□□ 2.68
TRIM3-206ENST00000528227 FASTKD5Q7L8L6 764 aaKnown RBP31.82■■■□□ 2.68
TRIM3-206ENST00000528227 TRIM47Q96LD4 638 aa31.82■■■□□ 2.68
TRIM3-206ENST00000528227 COL2A1P02458 1487 aaPredicted RBP31.82■■■□□ 2.68
TRIM3-206ENST00000528227 PTPRFP10586 1907 aa31.81■■■□□ 2.68
TRIM3-206ENST00000528227 TBC1D12O60347 775 aa31.81■■■□□ 2.68
TRIM3-206ENST00000528227 CYP2C8P10632 490 aa31.81■■■□□ 2.68
TRIM3-206ENST00000528227 TNNI3KQ59H18 835 aa31.81■■■□□ 2.68
TRIM3-206ENST00000528227 MIER1Q8N108 512 aa31.81■■■□□ 2.68
TRIM3-206ENST00000528227 FPGT-TNNI3KV9GXZ4 949 aa31.81■■■□□ 2.68
TRIM3-206ENST00000528227 LRP2BPQ9P2M1 347 aa31.8■■■□□ 2.68
TRIM3-206ENST00000528227 SRRDQ9UH36 339 aa31.8■■■□□ 2.68
TRIM3-206ENST00000528227 MKI67P46013 3256 aaKnown RBP31.79■■■□□ 2.68
TRIM3-206ENST00000528227 BCRP11274 1271 aa31.79■■■□□ 2.68
TRIM3-206ENST00000528227 SLC4A8Q2Y0W8 1093 aa31.79■■■□□ 2.68
TRIM3-206ENST00000528227 OSBPL5Q9H0X9 879 aaPredicted RBP31.79■■■□□ 2.68
TRIM3-206ENST00000528227 C1orf115Q9H7X2 142 aa31.79■■■□□ 2.68
TRIM3-206ENST00000528227 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.79■■■□□ 2.68
TRIM3-206ENST00000528227 MAST2Q6P0Q8 1798 aa31.79■■■□□ 2.68
TRIM3-206ENST00000528227 OSBPP22059 807 aa31.78■■■□□ 2.68
TRIM3-206ENST00000528227 OS9Q13438 667 aaPredicted RBP31.78■■■□□ 2.68
TRIM3-206ENST00000528227 TTC39AQ5SRH9 613 aa31.78■■■□□ 2.68
TRIM3-206ENST00000528227 GADL1Q6ZQY3 521 aa31.78■■■□□ 2.68
TRIM3-206ENST00000528227 FTSJ3Q8IY81 847 aaKnown RBP31.78■■■□□ 2.68
TRIM3-206ENST00000528227 DBNDD2Q9BQY9 259 aa31.78■■■□□ 2.68
TRIM3-206ENST00000528227 SLC45A1Q9Y2W3 748 aa31.78■■■□□ 2.68
TRIM3-206ENST00000528227 FAM196BA6NMK8 535 aa31.77■■■□□ 2.68
TRIM3-206ENST00000528227 FMNL1O95466 1100 aaPredicted RBP31.77■■■□□ 2.68
TRIM3-206ENST00000528227 MYCP01106 439 aaPredicted RBP31.77■■■□□ 2.68
TRIM3-206ENST00000528227 HOXD10P28358 340 aa31.77■■■□□ 2.68
TRIM3-206ENST00000528227 CCDC158Q5M9N0 1113 aa31.77■■■□□ 2.68
TRIM3-206ENST00000528227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.77■■■□□ 2.68
TRIM3-206ENST00000528227 SNRKQ9NRH2 765 aa31.77■■■□□ 2.68
TRIM3-206ENST00000528227 SURF6O75683 361 aaKnown RBP31.76■■■□□ 2.67
TRIM3-206ENST00000528227 RLBP1P12271 317 aa31.76■■■□□ 2.67
TRIM3-206ENST00000528227 ITPRIPQ8IWB1 547 aa31.76■■■□□ 2.67
TRIM3-206ENST00000528227 TRIM75PA6NK02 468 aa31.75■■■□□ 2.67
TRIM3-206ENST00000528227 ZBTB7BO15156 539 aaPredicted RBP31.75■■■□□ 2.67
TRIM3-206ENST00000528227 CCDC84Q86UT8 332 aaPredicted RBP31.75■■■□□ 2.67
TRIM3-206ENST00000528227 TEX11Q8IYF3 940 aa31.75■■■□□ 2.67
TRIM3-206ENST00000528227 MYPNQ86TC9 1320 aa31.75■■■□□ 2.67
TRIM3-206ENST00000528227 MGAMO43451 1857 aa31.74■■■□□ 2.67
TRIM3-206ENST00000528227 SH3RF3Q8TEJ3 882 aaPredicted RBP31.74■■■□□ 2.67
TRIM3-206ENST00000528227 NOP58Q9Y2X3 529 aaKnown RBP31.74■■■□□ 2.67
TRIM3-206ENST00000528227 FCGRTP55899 365 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms