RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CCDC84Q86UT8 332 aaPredicted RBP5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 FAM151AQ8WW52 585 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 APPBP2Q92624 585 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 AIDAQ96BJ3 306 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 FAM163AQ96GL9 167 aaPredicted RBP5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 CLMNQ96JQ2 1002 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 CSRNP1Q96S65 589 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 MRIQ9BWK5 157 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 OSBPL3Q9H4L5 887 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 GBA2Q9HCG7 927 aaPredicted RBP5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 ANGEL1Q9UNK9 670 aaKnown RBP5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 SLC4A4Q9Y6R1 1079 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 SCN4AP35499 1836 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 PSME4Q14997 1843 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 SSC5DA1L4H1 1573 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 AKAP11Q9UKA4 1901 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 ZBTB22O15209 634 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 GPAA1O43292 621 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 USP2O75604 605 aaPredicted RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 HSPA6P17066 643 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 INPP5BP32019 993 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 TNNI2P48788 182 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 PLCD1P51178 756 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 HUNKP57058 714 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 PPP4CP60510 307 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 TNFAIP1Q13829 316 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 RRP1BQ14684 758 aaKnown RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 UBE3CQ15386 1083 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 ZMYM1Q5SVZ6 1142 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 ZSCAN25Q6NSZ9 544 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 CYP4F22Q6NT55 531 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 C2orf69Q8N8R5 385 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 SLC44A5Q8NCS7 719 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 CNKSR2Q8WXI2 1034 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 ZKSCAN4Q969J2 545 aaPredicted RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 DYNLL2Q96FJ2 89 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 STRBPQ96SI9 672 aaKnown RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 ZIC5Q96T25 663 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 IDI2Q9BXS1 227 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 CRNKL1Q9BZJ0 848 aaKnown RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 EPB41L4AQ9HCS5 686 aaPredicted RBP5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 DIAPH3Q9NSV4 1193 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 MCM9Q9NXL9 1143 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 RFX7Q2KHR2 1363 aa5.54□□□□□ -1.52
CHMP4A-202ENST00000524955 MYH13Q9UKX3 1938 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 GSG1L2A8MUP6 293 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 MINDY4BA8MYZ0 360 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 USP17L12C9JPN9 530 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 USP17L21D6R901 530 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 FOXP2O15409 715 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 AOC2O75106 756 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 ENTPD3O75355 529 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 GDF11O95390 407 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 POLR3DP05423 398 aaPredicted RBP5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 CHMLP26374 656 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 NF2P35240 595 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 MMP14P50281 582 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 JAG1P78504 1218 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 ERICH6BQ5W0A0 696 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 SAPCD2Q86UD0 394 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 FAM83AQ86UY5 434 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 WRNIP1Q96S55 665 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 DNAJC18Q9H819 358 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 ELP3Q9H9T3 547 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 DCP1AQ9NPI6 582 aaPredicted RBP5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 MYO5AQ9Y4I1 1855 aaKnown RBP5.53□□□□□ -1.52
CHMP4A-202ENST00000524955 PPP1R12BO60237 982 aaPredicted RBP5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 PRDM1O75626 825 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 ZFYP08048 801 aaPredicted RBP5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 PLCG2P16885 1265 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 GJA5P36382 358 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 TDO2P48775 406 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 VEGFBP49765 207 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 ZNF157P51786 506 aaPredicted RBP5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 HAND2P61296 217 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 PTH1RQ03431 593 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CTDSPL2Q05D32 466 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 DGKZQ13574 1117 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 DEFB115Q30KQ5 88 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 SUPT20HL1Q3ZLR7 823 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 MCMDC2Q4G0Z9 681 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CTR9Q6PD62 1173 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 ARMC9Q7Z3E5 817 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CRACR2BQ8N4Y2 399 aaPredicted RBP5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CHMP4CQ96CF2 233 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CREBZFQ9NS37 354 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 PPP2R3BQ9Y5P8 575 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 TLL2Q9Y6L7 1015 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 MAST2Q6P0Q8 1798 aa5.52□□□□□ -1.53
CHMP4A-202ENST00000524955 CCDC171Q6TFL3 1326 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 PHF20L1A8MW92 1017 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 PATL2C9JE40 543 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 MPHOSPH10O00566 681 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 ECM2O94769 699 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms