RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
TTC39A-213ENST00000524442 COL2A1P02458 1487 aaPredicted RBP12.25□□□□□ -0.45
TTC39A-213ENST00000524442 ADD2P35612 726 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 PDE1AP54750 535 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 MAP3K10Q02779 954 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 GRM1Q13255 1194 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 PICALMQ13492 652 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 UBE3CQ15386 1083 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 ZSCAN29Q8IWY8 852 aaPredicted RBP12.24□□□□□ -0.45
TTC39A-213ENST00000524442 ZFPM1Q8IX07 1006 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.24□□□□□ -0.45
TTC39A-213ENST00000524442 PI4K2BQ8TCG2 481 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
TTC39A-213ENST00000524442 DOCK2Q92608 1830 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
TTC39A-213ENST00000524442 CSRNP1Q96S65 589 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 OSBPL5Q9H0X9 879 aaPredicted RBP12.24□□□□□ -0.45
TTC39A-213ENST00000524442 ZNF532Q9HCE3 1301 aa12.24□□□□□ -0.45
TTC39A-213ENST00000524442 THSD7BQ9C0I4 1608 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 TCRBV5S4A2TA0A5A2 114 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 TBC1D12O60347 775 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 CENPBP07199 599 aaPredicted RBP12.23□□□□□ -0.45
TTC39A-213ENST00000524442 ZFYP08048 801 aaPredicted RBP12.23□□□□□ -0.45
TTC39A-213ENST00000524442 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 TICAM2Q86XR7 235 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 TGFBRAP1Q8WUH2 860 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 RIOK1Q9BRS2 568 aaKnown RBP12.23□□□□□ -0.45
TTC39A-213ENST00000524442 LNPKQ9C0E8 428 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 ZNF112Q9UJU3 913 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 CSADQ9Y600 493 aa12.23□□□□□ -0.45
TTC39A-213ENST00000524442 FLT1P17948 1338 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
TTC39A-213ENST00000524442 AOC2O75106 756 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
TTC39A-213ENST00000524442 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
TTC39A-213ENST00000524442 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.22□□□□□ -0.45
TTC39A-213ENST00000524442 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 SH3BP5LQ7L8J4 393 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 WRNIP1Q96S55 665 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 BEGAINQ9BUH8 593 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
TTC39A-213ENST00000524442 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 PI4KBQ9UBF8 816 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
TTC39A-213ENST00000524442 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
TTC39A-213ENST00000524442 CA12O43570 354 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 USP5P45974 858 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 INHBEP58166 350 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 KIF23Q02241 960 aaPredicted RBP12.21□□□□□ -0.45
TTC39A-213ENST00000524442 VGLL4Q14135 290 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 FOXP4Q8IVH2 680 aaPredicted RBP12.21□□□□□ -0.45
TTC39A-213ENST00000524442 MAPKAPK5Q8IW41 473 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 CLMNQ96JQ2 1002 aa12.21□□□□□ -0.45
TTC39A-213ENST00000524442 HERC5Q9UII4 1024 aaKnown RBP12.21□□□□□ -0.45
TTC39A-213ENST00000524442 HLA-DOAP06340 250 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 NOL9Q5SY16 702 aaKnown RBP12.2□□□□□ -0.46
TTC39A-213ENST00000524442 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
TTC39A-213ENST00000524442 ERO1BQ86YB8 467 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 EVI5LQ96CN4 794 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 WNK4Q96J92 1243 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 ATP8A2Q9NTI2 1148 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 TAOK2Q9UL54 1235 aa12.2□□□□□ -0.46
TTC39A-213ENST00000524442 MYO5AQ9Y4I1 1855 aaKnown RBP12.2□□□□□ -0.46
TTC39A-213ENST00000524442 MANSC4A6NHS7 340 aaPredicted RBP12.19□□□□□ -0.46
TTC39A-213ENST00000524442 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 PHF20L1A8MW92 1017 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 CTNND1O60716 968 aaKnown RBP12.19□□□□□ -0.46
TTC39A-213ENST00000524442 NEFLP07196 543 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
TTC39A-213ENST00000524442 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
TTC39A-213ENST00000524442 TM4SF4P48230 202 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 PLEKHM2Q8IWE5 1019 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 APPBP2Q92624 585 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 ZIC5Q96T25 663 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
TTC39A-213ENST00000524442 SNCAIPQ9Y6H5 919 aa12.19□□□□□ -0.46
TTC39A-213ENST00000524442 MBD4O95243 580 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 INPP5BP32019 993 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 PPATQ06203 517 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 ZKSCAN4Q969J2 545 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-213ENST00000524442 OPTNQ96CV9 577 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 PUS7LQ9H0K6 701 aaKnown RBP12.18□□□□□ -0.46
TTC39A-213ENST00000524442 EHD4Q9H223 541 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 ARMT1Q9H993 441 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms