RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MX1P20591 662 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 GJA5P36382 358 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 MAP2K2P36507 400 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 ZNF157P51786 506 aaPredicted RBP14.52□□□□□ -0.09
CLN8-207ENST00000524258 PDE1AP54750 535 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 CCDC102AQ96A19 550 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 LNPKQ9C0E8 428 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 WBP1LQ9NX94 342 aa14.52□□□□□ -0.09
CLN8-207ENST00000524258 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
CLN8-207ENST00000524258 PHF20L1A8MW92 1017 aa14.51□□□□□ -0.09
CLN8-207ENST00000524258 BAG3O95817 575 aa14.51□□□□□ -0.09
CLN8-207ENST00000524258 TTLL12Q14166 644 aaPredicted RBP14.51□□□□□ -0.09
CLN8-207ENST00000524258 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
CLN8-207ENST00000524258 TEX11Q8IYF3 940 aa14.51□□□□□ -0.09
CLN8-207ENST00000524258 KBTBD3Q8NAB2 608 aa14.51□□□□□ -0.09
CLN8-207ENST00000524258 OSBPL5Q9H0X9 879 aaPredicted RBP14.51□□□□□ -0.09
CLN8-207ENST00000524258 GLRX3O76003 335 aaKnown RBP14.5□□□□□ -0.09
CLN8-207ENST00000524258 PLCG2P16885 1265 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 IREB2P48200 963 aaKnown RBP14.5□□□□□ -0.09
CLN8-207ENST00000524258 MAP3K9P80192 1104 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 NOGQ13253 232 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 PICALMQ13492 652 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 UBE3CQ15386 1083 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 SPRYD7Q5W111 196 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 B4GALNT3Q6L9W6 998 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 MIGA2Q7L4E1 593 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
CLN8-207ENST00000524258 PLEKHM2Q8IWE5 1019 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 TGFBRAP1Q8WUH2 860 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
CLN8-207ENST00000524258 FLT1P17948 1338 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 TBC1D12O60347 775 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 PDE4AP27815 886 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 INPP5BP32019 993 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
CLN8-207ENST00000524258 VGLL4Q14135 290 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
CLN8-207ENST00000524258 ANKRD13AQ8IZ07 590 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 CSRNP1Q96S65 589 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 OSBPL3Q9H4L5 887 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
CLN8-207ENST00000524258 ERC2O15083 957 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 GRM1Q13255 1194 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 RRP1BQ14684 758 aaKnown RBP14.48□□□□□ -0.09
CLN8-207ENST00000524258 MAPKAPK5Q8IW41 473 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 LCORLQ8N3X6 602 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 HOOK2Q96ED9 719 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 SLC10A4Q96EP9 437 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 WNK4Q96J92 1243 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 ZNF341Q9BYN7 854 aa14.48□□□□□ -0.09
CLN8-207ENST00000524258 PUS7LQ9H0K6 701 aaKnown RBP14.48□□□□□ -0.09
CLN8-207ENST00000524258 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 CDK5RAP2Q96SN8 1893 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 MAGEB6P1A0A0J9YX57 407 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 HSPA1AP0DMV8 641 aaKnown RBP14.47□□□□□ -0.09
CLN8-207ENST00000524258 HSPA1BP0DMV9 641 aaKnown RBP14.47□□□□□ -0.09
CLN8-207ENST00000524258 NOL9Q5SY16 702 aaKnown RBP14.47□□□□□ -0.09
CLN8-207ENST00000524258 DCAF15Q66K64 600 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 CERS3Q8IU89 383 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 ZKSCAN4Q969J2 545 aaPredicted RBP14.47□□□□□ -0.09
CLN8-207ENST00000524258 OSBP2Q969R2 916 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 WRNIP1Q96S55 665 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
CLN8-207ENST00000524258 DNAJC18Q9H819 358 aa14.47□□□□□ -0.09
CLN8-207ENST00000524258 SIPA1L1O43166 1804 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 FOXN1O15353 648 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 RNF113AO15541 343 aaKnown RBP14.46□□□□□ -0.09
CLN8-207ENST00000524258 PRKAB2O43741 272 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 TM4SF4P48230 202 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLN8-207ENST00000524258 ARMT1Q9H993 441 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 ELP3Q9H9T3 547 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 PALD1Q9ULE6 856 aa14.46□□□□□ -0.09
CLN8-207ENST00000524258 FOCADQ5VW36 1801 aa14.45□□□□□ -0.1
CLN8-207ENST00000524258 TESPA1A2RU30 521 aaPredicted RBP14.45□□□□□ -0.1
CLN8-207ENST00000524258 SPDYE5A6NIY4 337 aa14.45□□□□□ -0.1
CLN8-207ENST00000524258 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
CLN8-207ENST00000524258 MBD4O95243 580 aa14.45□□□□□ -0.1
CLN8-207ENST00000524258 ZBTB48P10074 688 aaPredicted RBP14.45□□□□□ -0.1
CLN8-207ENST00000524258 MAP2K1Q02750 393 aaPredicted RBP14.45□□□□□ -0.1
CLN8-207ENST00000524258 EVX2Q03828 476 aa14.45□□□□□ -0.1
CLN8-207ENST00000524258 STRBPQ96SI9 672 aaKnown RBP14.45□□□□□ -0.1
CLN8-207ENST00000524258 DHX36Q9H2U1 1008 aaKnown RBP14.45□□□□□ -0.1
CLN8-207ENST00000524258 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
CLN8-207ENST00000524258 JAG1P78504 1218 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
CLN8-207ENST00000524258 ZMYM1Q5SVZ6 1142 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 ZSCAN25Q6NSZ9 544 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 ZSCAN29Q8IWY8 852 aaPredicted RBP14.44□□□□□ -0.1
CLN8-207ENST00000524258 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 APPBP2Q92624 585 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 OPTNQ96CV9 577 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 PI4KBQ9UBF8 816 aa14.44□□□□□ -0.1
CLN8-207ENST00000524258 SAP30BPQ9UHR5 308 aaKnown RBP14.44□□□□□ -0.1
CLN8-207ENST00000524258 DDX60LQ5H9U9 1706 aaKnown RBP14.44□□□□□ -0.1
CLN8-207ENST00000524258 SMIM22K7EJ46 135 aa14.43□□□□□ -0.1
CLN8-207ENST00000524258 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms