RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SLF2Q8IX21 1173 aa23.21■■□□□ 1.31
PTP4A3-206ENST00000524028 SPATA5Q8NB90 893 aa23.21■■□□□ 1.31
PTP4A3-206ENST00000524028 CENPFP49454 3210 aa23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 G3BP1Q13283 466 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 PICALMQ13492 652 aa23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 ZNF333Q96JL9 665 aa23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 CPA4Q9UI42 421 aa23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 MYH2Q9UKX2 1941 aa23.2■■□□□ 1.3
PTP4A3-206ENST00000524028 ADGRA2Q96PE1 1338 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 EN2P19622 333 aaPredicted RBP23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 CTGFP29279 349 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 ARID4AP29374 1257 aaPredicted RBP23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 POLA2Q14181 598 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 GORABQ5T7V8 394 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 GPAT2Q6NUI2 795 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 ZSCAN29Q8IWY8 852 aaPredicted RBP23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 SCYL3Q8IZE3 742 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 MIER1Q8N108 512 aa23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 NSUN4Q96CB9 384 aaKnown RBP23.19■■□□□ 1.3
PTP4A3-206ENST00000524028 ECM2O94769 699 aaPredicted RBP23.18■■□□□ 1.3
PTP4A3-206ENST00000524028 PTPRAP18433 802 aa23.18■■□□□ 1.3
PTP4A3-206ENST00000524028 MCAMP43121 646 aa23.18■■□□□ 1.3
PTP4A3-206ENST00000524028 KIF22Q14807 665 aa23.18■■□□□ 1.3
PTP4A3-206ENST00000524028 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
PTP4A3-206ENST00000524028 CXCL11O14625 94 aa23.17■■□□□ 1.3
PTP4A3-206ENST00000524028 HNRNPUQ00839 825 aaKnown RBP eCLIP23.17■■□□□ 1.3
PTP4A3-206ENST00000524028 SLC9C1Q4G0N8 1177 aa23.17■■□□□ 1.3
PTP4A3-206ENST00000524028 ZHX2Q9Y6X8 837 aa23.17■■□□□ 1.3
PTP4A3-206ENST00000524028 AK9Q5TCS8 1911 aa23.16■■□□□ 1.3
PTP4A3-206ENST00000524028 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
PTP4A3-206ENST00000524028 PICK1Q9NRD5 415 aa23.16■■□□□ 1.3
PTP4A3-206ENST00000524028 AFG3L2Q9Y4W6 797 aa23.16■■□□□ 1.3
PTP4A3-206ENST00000524028 CYP2C8P10632 490 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 ATP8B2P98198 1209 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 NBPF11Q86T75 865 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 SH3TC2Q8TF17 1288 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 TRIM47Q96LD4 638 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 RAI14Q9P0K7 980 aa23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.15■■□□□ 1.3
PTP4A3-206ENST00000524028 A0A0G2JLL6 359 aaPredicted RBP23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 NPM3O75607 178 aaKnown RBP23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 GNRH1P01148 92 aa23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 RLBP1P12271 317 aa23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 GSTO1P78417 241 aa23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 TNNI3KQ59H18 835 aa23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 PRRT2Q7Z6L0 340 aaPredicted RBP23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 FPGT-TNNI3KV9GXZ4 949 aa23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 BRCA2P51587 3418 aa23.14■■□□□ 1.29
PTP4A3-206ENST00000524028 DOCK2Q92608 1830 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 FAM196BA6NMK8 535 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 CTNND1O60716 968 aaKnown RBP23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 MYCP01106 439 aaPredicted RBP23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 LDHCP07864 332 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 UQCRFS1P1P0C7P4 283 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 PSMC4P43686 418 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 CCDC84Q86UT8 332 aaPredicted RBP23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 DBNDD2Q9BQY9 259 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 TMEM106CQ9BVX2 250 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 GPR108Q9NPR9 543 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 SNRKQ9NRH2 765 aa23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 MKI67P46013 3256 aaKnown RBP23.13■■□□□ 1.29
PTP4A3-206ENST00000524028 ZBTB7BO15156 539 aaPredicted RBP23.12■■□□□ 1.29
PTP4A3-206ENST00000524028 TBC1D12O60347 775 aa23.12■■□□□ 1.29
PTP4A3-206ENST00000524028 PARK7Q99497 189 aaKnown RBP23.12■■□□□ 1.29
PTP4A3-206ENST00000524028 LRP2BPQ9P2M1 347 aa23.12■■□□□ 1.29
PTP4A3-206ENST00000524028 RBBP6Q7Z6E9 1792 aaKnown RBP23.12■■□□□ 1.29
PTP4A3-206ENST00000524028 KIAA0100Q14667 2235 aaKnown RBP23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 BCRP11274 1271 aa23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 OSBPP22059 807 aa23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 PRMT2P55345 433 aa23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 FASTKD5Q7L8L6 764 aaKnown RBP23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 SRRDQ9UH36 339 aa23.11■■□□□ 1.29
PTP4A3-206ENST00000524028 MAP4K4O95819 1239 aaPredicted RBP23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 OS9Q13438 667 aaPredicted RBP23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 SLC4A8Q2Y0W8 1093 aa23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 TTC39AQ5SRH9 613 aa23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 GADL1Q6ZQY3 521 aa23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 SH3RF3Q8TEJ3 882 aaPredicted RBP23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 OSBPL5Q9H0X9 879 aaPredicted RBP23.1■■□□□ 1.29
PTP4A3-206ENST00000524028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.1■■□□□ 1.291e-8■■■■□ 21.9
PTP4A3-206ENST00000524028 TRIM75PA6NK02 468 aa23.09■■□□□ 1.29
PTP4A3-206ENST00000524028 FMNL1O95466 1100 aaPredicted RBP23.09■■□□□ 1.29
PTP4A3-206ENST00000524028 ITPRIPQ8IWB1 547 aa23.09■■□□□ 1.29
PTP4A3-206ENST00000524028 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
PTP4A3-206ENST00000524028 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
PTP4A3-206ENST00000524028 CYP2E1P05181 493 aaPredicted RBP23.08■■□□□ 1.29
PTP4A3-206ENST00000524028 RRP1BQ14684 758 aaKnown RBP23.08■■□□□ 1.29
PTP4A3-206ENST00000524028 CCDC158Q5M9N0 1113 aa23.08■■□□□ 1.29
PTP4A3-206ENST00000524028 TEX11Q8IYF3 940 aa23.08■■□□□ 1.29
PTP4A3-206ENST00000524028 COL2A1P02458 1487 aaPredicted RBP23.07■■□□□ 1.28
PTP4A3-206ENST00000524028 HOXD10P28358 340 aa23.07■■□□□ 1.28
PTP4A3-206ENST00000524028 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
PTP4A3-206ENST00000524028 ADGRA1Q86SQ6 560 aa23.07■■□□□ 1.28
PTP4A3-206ENST00000524028 ZNF512BQ96KM6 892 aaPredicted RBP23.07■■□□□ 1.28
PTP4A3-206ENST00000524028 AATFQ9NY61 560 aaKnown RBP eCLIP23.07■■□□□ 1.286e-8■■■■□ 22.8
PTP4A3-206ENST00000524028 TLR7Q9NYK1 1049 aaKnown RBP23.07■■□□□ 1.28
PTP4A3-206ENST00000524028 SLC45A1Q9Y2W3 748 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms