RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	RAB11FIP3	O75154	756 aa		11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	TM4SF4	P48230	202 aa		11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	DYNLL1	P63167	89 aa	Known RBP	11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	MAP3K9	P80192	1104 aa		11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	NAA16	Q6N069	864 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	CLASRP	Q8N2M8	674 aa	Known RBP	11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PABPC1-222	ENST00000523555	FAM196B	A6NMK8	535 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	3e-8	■■□□□ 11.7
PABPC1-222	ENST00000523555	ENTPD3	O75355	529 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	IDH1	O75874	414 aa	Known RBP	11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	TBC1D8	O95759	1140 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	CHGB	P05060	677 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	IFIT2	P09913	472 aa	Known RBP	11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	SLFNL1	Q499Z3	407 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	SLF2	Q8IX21	1173 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	TNS4	Q8IZW8	715 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	PTPN18	Q99952	460 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	DCTPP1	Q9H773	170 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	SAGE1	Q9NXZ1	904 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	ZSWIM8	A7E2V4	1837 aa		11.63	□□□□□ -0.55
PABPC1-222	ENST00000523555	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	UNCX	A6NJT0	531 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	CA12	O43570	354 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	LDHC	P07864	332 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	ZBTB48	P10074	688 aa	Predicted RBP	11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	GSTO1	P78417	241 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	TSHZ3	Q63HK5	1081 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	TEX11	Q8IYF3	940 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	MAGEB6	Q8N7X4	407 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	MIGA1	Q8NAN2	632 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	OTUD5	Q96G74	571 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	MS4A4A	Q96JQ5	239 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	DNAJC2	Q99543	621 aa	Known RBP	11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	ZNF341	Q9BYN7	854 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	LRRCC1	Q9C099	1032 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	BOLA2	Q9H3K6	86 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	ZNF112	Q9UJU3	913 aa		11.62	□□□□□ -0.55
PABPC1-222	ENST00000523555	PHF20L1	A8MW92	1017 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	GOLIM4	O00461	696 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	CYP7A1	P22680	504 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	IFFO2	Q5TF58	517 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	DCAF15	Q66K64	600 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	IFNL1	Q8IU54	200 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	CSAD	Q9Y600	493 aa		11.61	□□□□□ -0.55
PABPC1-222	ENST00000523555	COL2A1	P02458	1487 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	MANSC4	A6NHS7	340 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	SPDYE5	A6NIY4	337 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	IRF6	O14896	467 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	PPP4C	P60510	307 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	MAP3K10	Q02779	954 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	SREBF2	Q12772	1141 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	RRP1B	Q14684	758 aa	Known RBP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	SLC4A8	Q2Y0W8	1093 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	CCDC84	Q86UT8	332 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	MAPKAPK5	Q8IW41	473 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	REM2	Q8IYK8	340 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	TGFBRAP1	Q8WUH2	860 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	BRI3BP	Q8WY22	251 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	CENPF	P49454	3210 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	FLT1	P17948	1338 aa		11.6	□□□□□ -0.55
PABPC1-222	ENST00000523555	TCRBV5S4A2T	A0A5A2	114 aa		11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	TESPA1	A2RU30	521 aa	Predicted RBP	11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	ATP5J	P18859	108 aa		11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	EVX2	Q03828	476 aa		11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	EXOC6	Q8TAG9	804 aa		11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	RIOK1	Q9BRS2	568 aa	Known RBP	11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	DNAJC18	Q9H819	358 aa		11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	HTT	P42858	3142 aa		11.59	□□□□□ -0.55
PABPC1-222	ENST00000523555	MYH8	P13535	1937 aa		11.58	□□□□□ -0.55
PABPC1-222	ENST00000523555	CCL15-CCL14	A0A0B4J2E2	113 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	NPM3	O75607	178 aa	Known RBP	11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	CAPN15	O75808	1086 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	BAG3	O95817	575 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	PDE6A	P16499	860 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	CAP1	Q01518	475 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	CCL15	Q16663	113 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	NOL9	Q5SY16	702 aa	Known RBP	11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	ERO1B	Q86YB8	467 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	FAM43A	Q8N2R8	423 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	HOOK2	Q96ED9	719 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	HAUS7	Q99871	368 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	PAG1	Q9NWQ8	432 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	SAP30BP	Q9UHR5	308 aa	Known RBP	11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	ZNF532	Q9HCE3	1301 aa		11.58	□□□□□ -0.56
PABPC1-222	ENST00000523555	LOC285556	D6RIA3	1793 aa		11.57	□□□□□ -0.56
PABPC1-222	ENST00000523555	GPR25	O00155	361 aa		11.57	□□□□□ -0.56
PABPC1-222	ENST00000523555	MAP4K4	O95819	1239 aa	Predicted RBP	11.57	□□□□□ -0.56
PABPC1-222	ENST00000523555	JAG1	P78504	1218 aa		11.57	□□□□□ -0.56
PABPC1-222	ENST00000523555	MAP3K12	Q12852	859 aa		11.57	□□□□□ -0.56
PABPC1-222	ENST00000523555	CRHR2	Q13324	411 aa		11.57	□□□□□ -0.56
PABPC1-222	ENST00000523555	PPIL2	Q13356	520 aa		11.57	□□□□□ -0.56

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