RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
SPIDR-214ENST00000521550 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
SPIDR-214ENST00000521550 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
SPIDR-214ENST00000521550 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
SPIDR-214ENST00000521550 CTAGE5O15320 804 aa16.39■□□□□ 0.21
SPIDR-214ENST00000521550 DTNBO60941 627 aa16.39■□□□□ 0.21
SPIDR-214ENST00000521550 CAVIN2O95810 425 aa16.39■□□□□ 0.21
SPIDR-214ENST00000521550 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.21
SPIDR-214ENST00000521550 DPY19L2Q6NUT2 758 aa16.39■□□□□ 0.21
SPIDR-214ENST00000521550 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
SPIDR-214ENST00000521550 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
SPIDR-214ENST00000521550 RNF41Q9H4P4 317 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-214ENST00000521550 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
SPIDR-214ENST00000521550 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-214ENST00000521550 MBD4O95243 580 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 IFNL3Q8IZI9 196 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-214ENST00000521550 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 SASS6Q6UVJ0 657 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 RTKN2Q8IZC4 609 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
SPIDR-214ENST00000521550 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 DACT1Q9NYF0 836 aa16.38■□□□□ 0.21
SPIDR-214ENST00000521550 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
SPIDR-214ENST00000521550 SEMA3EO15041 775 aa16.37■□□□□ 0.21
SPIDR-214ENST00000521550 TDO2P48775 406 aa16.37■□□□□ 0.21
SPIDR-214ENST00000521550 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPIDR-214ENST00000521550 BCAMP50895 628 aa16.37■□□□□ 0.21
SPIDR-214ENST00000521550 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
SPIDR-214ENST00000521550 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
SPIDR-214ENST00000521550 DENND2AQ9ULE3 1009 aa16.37■□□□□ 0.21
SPIDR-214ENST00000521550 ERICH2A1L162 156 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 SH2B2O14492 632 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-214ENST00000521550 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-214ENST00000521550 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-214ENST00000521550 ANTXR2P58335 489 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 TMED8Q6PL24 325 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-214ENST00000521550 OLFM4Q6UX06 510 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 TMTC2Q8N394 836 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 DOCK2Q92608 1830 aa16.36■□□□□ 0.21
SPIDR-214ENST00000521550 ZBTB43O43298 467 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 LIG1P18858 919 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 LIFRP42702 1097 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 WASF1Q92558 559 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
SPIDR-214ENST00000521550 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 KDM4AO75164 1064 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 TRIM29Q14134 588 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 TMEM67Q5HYA8 995 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
SPIDR-214ENST00000521550 WDR90Q96KV7 1748 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 TPM3P06753 285 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 FOSBP53539 338 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 SF3A1Q15459 793 aaKnown RBP16.34■□□□□ 0.21
SPIDR-214ENST00000521550 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 SGMS1Q86VZ5 419 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 KCNG4Q8TDN1 519 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-214ENST00000521550 RAI14Q9P0K7 980 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
SPIDR-214ENST00000521550 GOLGA6L6A8MZA4 724 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 B4E1Z4 1266 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 IFIT3O14879 490 aaKnown RBP16.33■□□□□ 0.21
SPIDR-214ENST00000521550 FDPSP14324 419 aaKnown RBP16.33■□□□□ 0.21
SPIDR-214ENST00000521550 CYP7A1P22680 504 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 TYRO3Q06418 890 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 FSTL1Q12841 308 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 RTEL1Q9NZ71 1219 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.21
SPIDR-214ENST00000521550 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 KINO60870 393 aaKnown RBP16.33■□□□□ 0.2
SPIDR-214ENST00000521550 IGSF3O75054 1194 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 YEATS4O95619 227 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 ME1P48163 572 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.2
SPIDR-214ENST00000521550 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
SPIDR-214ENST00000521550 APOA5Q6Q788 366 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 RBM43Q6ZSC3 357 aaKnown RBP16.33■□□□□ 0.2
SPIDR-214ENST00000521550 CCAR1Q8IX12 1150 aaKnown RBP16.33■□□□□ 0.2
SPIDR-214ENST00000521550 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
SPIDR-214ENST00000521550 NBPF3Q9H094 633 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms