RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 FRAT1Q92837 279 aaPredicted RBP25.11■■□□□ 1.61
PABPC1-217ENST00000521067 CLUAP1Q96AJ1 413 aa25.11■■□□□ 1.61
PABPC1-217ENST00000521067 NEUROD6Q96NK8 337 aa25.11■■□□□ 1.61
PABPC1-217ENST00000521067 HMG20BQ9P0W2 317 aa25.11■■□□□ 1.61
PABPC1-217ENST00000521067 ZSWIM8A7E2V4 1837 aa25.11■■□□□ 1.61
PABPC1-217ENST00000521067 CXCL11O14625 94 aa25.1■■□□□ 1.61
PABPC1-217ENST00000521067 RHBDL3P58872 404 aa25.1■■□□□ 1.61
PABPC1-217ENST00000521067 MVPQ14764 893 aaKnown RBP25.1■■□□□ 1.61
PABPC1-217ENST00000521067 KIF22Q14807 665 aa25.1■■□□□ 1.61
PABPC1-217ENST00000521067 TBC1D9Q6ZT07 1266 aa25.1■■□□□ 1.61
PABPC1-217ENST00000521067 NBPF11Q86T75 865 aa25.1■■□□□ 1.61
PABPC1-217ENST00000521067 TRIM47Q96LD4 638 aa25.1■■□□□ 1.61
PABPC1-217ENST00000521067 GPR75-ASB3A0A0A6YYF3 556 aa25.09■■□□□ 1.61
PABPC1-217ENST00000521067 IPO8O15397 1037 aaKnown RBP25.09■■□□□ 1.61
PABPC1-217ENST00000521067 GNAI2P04899 355 aa25.09■■□□□ 1.61
PABPC1-217ENST00000521067 SPTY2D1Q68D10 685 aaPredicted RBP25.09■■□□□ 1.61
PABPC1-217ENST00000521067 TMEM106CQ9BVX2 250 aa25.09■■□□□ 1.61
PABPC1-217ENST00000521067 ZHX2Q9Y6X8 837 aa25.09■■□□□ 1.61
PABPC1-217ENST00000521067 AK9Q5TCS8 1911 aa25.09■■□□□ 1.61
PABPC1-217ENST00000521067 MROH7-TTC4A0A0A0MT08 1334 aa25.09■■□□□ 1.61
PABPC1-217ENST00000521067 MYH2Q9UKX2 1941 aa25.08■■□□□ 1.61
PABPC1-217ENST00000521067 PTPRAP18433 802 aa25.08■■□□□ 1.61
PABPC1-217ENST00000521067 PSMC4P43686 418 aa25.08■■□□□ 1.61
PABPC1-217ENST00000521067 PICALMQ13492 652 aa25.08■■□□□ 1.61
PABPC1-217ENST00000521067 ERICH6Q7L0X2 663 aa25.08■■□□□ 1.61
PABPC1-217ENST00000521067 ZSCAN29Q8IWY8 852 aaPredicted RBP25.08■■□□□ 1.61
PABPC1-217ENST00000521067 SCYL3Q8IZE3 742 aa25.08■■□□□ 1.61
PABPC1-217ENST00000521067 GNRH1P01148 92 aa25.07■■□□□ 1.6
PABPC1-217ENST00000521067 CYP2C8P10632 490 aa25.07■■□□□ 1.6
PABPC1-217ENST00000521067 SLF2Q8IX21 1173 aa25.07■■□□□ 1.6
PABPC1-217ENST00000521067 AFG3L2Q9Y4W6 797 aa25.07■■□□□ 1.6
PABPC1-217ENST00000521067 TMEM57Q8N5G2 664 aa25.06■■□□□ 1.6
PABPC1-217ENST00000521067 SPATA5Q8NB90 893 aa25.06■■□□□ 1.6
PABPC1-217ENST00000521067 NSUN4Q96CB9 384 aaKnown RBP25.06■■□□□ 1.6
PABPC1-217ENST00000521067 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.06■■□□□ 1.6
PABPC1-217ENST00000521067 SRRDQ9UH36 339 aa25.06■■□□□ 1.6
PABPC1-217ENST00000521067 A0A0G2JLL6 359 aaPredicted RBP25.05■■□□□ 1.6
PABPC1-217ENST00000521067 OSBPP22059 807 aa25.05■■□□□ 1.6
PABPC1-217ENST00000521067 SLC4A8Q2Y0W8 1093 aa25.05■■□□□ 1.6
PABPC1-217ENST00000521067 PRRT2Q7Z6L0 340 aaPredicted RBP25.05■■□□□ 1.6
PABPC1-217ENST00000521067 CCDC84Q86UT8 332 aaPredicted RBP25.05■■□□□ 1.6
PABPC1-217ENST00000521067 RBBP6Q7Z6E9 1792 aaKnown RBP25.05■■□□□ 1.6
PABPC1-217ENST00000521067 BCRP11274 1271 aa25.04■■□□□ 1.6
PABPC1-217ENST00000521067 ARID4AP29374 1257 aaPredicted RBP25.04■■□□□ 1.6
PABPC1-217ENST00000521067 MCAMP43121 646 aa25.04■■□□□ 1.6
PABPC1-217ENST00000521067 PRMT2P55345 433 aa25.04■■□□□ 1.6
PABPC1-217ENST00000521067 G3BP1Q13283 466 aaKnown RBP eCLIP25.04■■□□□ 1.69e-14■■■■□ 26.5
PABPC1-217ENST00000521067 PICK1Q9NRD5 415 aa25.04■■□□□ 1.6
PABPC1-217ENST00000521067 FAM196BA6NMK8 535 aa25.03■■□□□ 1.6
PABPC1-217ENST00000521067 CTNND1O60716 968 aaKnown RBP25.03■■□□□ 1.6
PABPC1-217ENST00000521067 FMNL1O95466 1100 aaPredicted RBP25.03■■□□□ 1.6
PABPC1-217ENST00000521067 MTFR1Q15390 333 aa25.03■■□□□ 1.6
PABPC1-217ENST00000521067 GORABQ5T7V8 394 aa25.03■■□□□ 1.6
PABPC1-217ENST00000521067 PARK7Q99497 189 aaKnown RBP25.02■■□□□ 1.6
PABPC1-217ENST00000521067 TBC1D12O60347 775 aa25.01■■□□□ 1.59
PABPC1-217ENST00000521067 NPM3O75607 178 aaKnown RBP25.01■■□□□ 1.59
PABPC1-217ENST00000521067 POLA2Q14181 598 aa25.01■■□□□ 1.59
PABPC1-217ENST00000521067 GADL1Q6ZQY3 521 aa25.01■■□□□ 1.59
PABPC1-217ENST00000521067 FASTKD5Q7L8L6 764 aaKnown RBP25.01■■□□□ 1.59
PABPC1-217ENST00000521067 RAI14Q9P0K7 980 aa25.01■■□□□ 1.59
PABPC1-217ENST00000521067 TRIM75PA6NK02 468 aa24.99■■□□□ 1.59
PABPC1-217ENST00000521067 LDHCP07864 332 aa24.99■■□□□ 1.59
PABPC1-217ENST00000521067 RRP1BQ14684 758 aaKnown RBP24.99■■□□□ 1.59
PABPC1-217ENST00000521067 ZKSCAN2Q63HK3 967 aa24.99■■□□□ 1.59
PABPC1-217ENST00000521067 SNRKQ9NRH2 765 aa24.99■■□□□ 1.59
PABPC1-217ENST00000521067 HOXD10P28358 340 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 GSTO1P78417 241 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 ATP8B2P98198 1209 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 PRKCZQ05513 592 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 RAET1EQ8TD07 263 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 OSBPL5Q9H0X9 879 aaPredicted RBP24.98■■□□□ 1.59
PABPC1-217ENST00000521067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.98■■□□□ 1.59
PABPC1-217ENST00000521067 GABRQQ9UN88 632 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 DOCK2Q92608 1830 aa24.98■■□□□ 1.59
PABPC1-217ENST00000521067 MYPNQ86TC9 1320 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 UQCRFS1P1P0C7P4 283 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 GRK4P32298 578 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 TNNI3KQ59H18 835 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 SSH3Q8TE77 659 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 SH3RF3Q8TEJ3 882 aaPredicted RBP24.97■■□□□ 1.59
PABPC1-217ENST00000521067 SHISA4Q96DD7 197 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 DBNDD2Q9BQY9 259 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 C1orf115Q9H7X2 142 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 LRP2BPQ9P2M1 347 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 SLC45A1Q9Y2W3 748 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 FPGT-TNNI3KV9GXZ4 949 aa24.97■■□□□ 1.59
PABPC1-217ENST00000521067 MAP4K4O95819 1239 aaPredicted RBP24.96■■□□□ 1.59
PABPC1-217ENST00000521067 HABP4Q5JVS0 413 aaKnown RBP24.96■■□□□ 1.59
PABPC1-217ENST00000521067 GCC1Q96CN9 775 aa24.96■■□□□ 1.59
PABPC1-217ENST00000521067 GPR108Q9NPR9 543 aa24.96■■□□□ 1.59
PABPC1-217ENST00000521067 CEP290O15078 2479 aa24.95■■□□□ 1.59
PABPC1-217ENST00000521067 RLBP1P12271 317 aa24.95■■□□□ 1.58
PABPC1-217ENST00000521067 FCGRTP55899 365 aa24.95■■□□□ 1.58
PABPC1-217ENST00000521067 TREML2Q5T2D2 321 aa24.95■■□□□ 1.58
PABPC1-217ENST00000521067 TEX11Q8IYF3 940 aa24.95■■□□□ 1.58
PABPC1-217ENST00000521067 PCDH10Q9P2E7 1040 aa24.95■■□□□ 1.58
PABPC1-217ENST00000521067 CYP2E1P05181 493 aaPredicted RBP24.94■■□□□ 1.58
PABPC1-217ENST00000521067 ADGRA1Q86SQ6 560 aa24.94■■□□□ 1.58
PABPC1-217ENST00000521067 AGTPBP1Q9UPW5 1226 aa24.94■■□□□ 1.58
PABPC1-217ENST00000521067 ZBTB7BO15156 539 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms