RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CARD10Q9BWT7 1032 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 GPN3Q9UHW5 284 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 SAMM50Q9Y512 469 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 BMP3P12645 472 aa5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 GSTM4Q03013 218 aa5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 HP1BP3Q5SSJ5 553 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 TPTE2Q6XPS3 522 aa5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 CILP2Q8IUL8 1156 aa5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 BACH2Q9BYV9 841 aa5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 PAK6Q9NQU5 681 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 KIAA1522Q9P206 1035 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P41-201ENST00000520234 E9PSI1 815 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 HNRNPUQ00839 825 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 CCDC85BQ15834 202 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 MEI1Q5TIA1 1274 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 HGSNATQ68CP4 663 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 TTLL10Q6ZVT0 673 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 SIAH1Q8IUQ4 282 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 ZSCAN18Q8TBC5 510 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 OSBPL1AQ9BXW6 950 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 EMILIN2Q9BXX0 1053 aa5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 METTL5Q9NRN9 209 aaKnown RBP5.51□□□□□ -1.53
HMGB1P41-201ENST00000520234 ENC1O14682 589 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 SCAMP3O14828 347 aaKnown RBP5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 SART1O43290 800 aaKnown RBP5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 NME2P22392 152 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 NLRP12P59046 1061 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 POU4F3Q15319 338 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 DUOXA2Q1HG44 320 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 TSNAXIP1Q2TAA8 658 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 LDLRAD1Q5T700 205 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 SCARA3Q6AZY7 606 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 TMEM87AQ8NBN3 555 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 ZNF428Q96B54 188 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 CORO1BQ9BR76 489 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 TRIM56Q9BRZ2 755 aaKnown RBP5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 NRSN2Q9GZP1 204 aa5.5□□□□□ -1.53
HMGB1P41-201ENST00000520234 ADAM11O75078 769 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 FBXO24O75426 580 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 RECKO95980 971 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 ARNTP27540 789 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 CFPP27918 469 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 ZNF157P51786 506 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 RPS26P62854 115 aaKnown RBP5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 LRRC14Q15048 493 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 KIAA1211Q6ZU35 1233 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 SULF2Q8IWU5 870 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 TMEM40Q8WWA1 233 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 FAM84AQ96KN4 292 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 METTL22Q9BUU2 404 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 USP26Q9BXU7 913 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 KCNK4Q9NYG8 393 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 CYP8B1Q9UNU6 501 aa5.49□□□□□ -1.53
HMGB1P41-201ENST00000520234 LOC100289279A0A1B0GTE1 492 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 MEGF11A6BM72 1044 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 DDX3YO15523 660 aaKnown RBP5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 F13BP05160 661 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 GSTP1P09211 210 aaKnown RBP5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 MAOBP27338 520 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 ZNF76P36508 570 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 PWP1Q13610 501 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 ANKRD34AQ69YU3 496 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 LCNL1Q6ZST4 164 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 RSRP1Q9BUV0 290 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 KRT82Q9NSB4 513 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 SYNGAP1Q96PV0 1343 aa5.48□□□□□ -1.53
HMGB1P41-201ENST00000520234 PAGE1O75459 146 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 CELA3AP09093 270 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 BMP6P22004 513 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 EXOSC6Q5RKV6 272 aaKnown RBP5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 PCNX4Q63HM2 1172 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 TTBK2Q6IQ55 1244 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 HS2ST1Q7LGA3 356 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 PDZD3Q86UT5 571 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 RELL1Q8IUW5 271 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 FAM168AQ92567 244 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 RNF208Q9H0X6 261 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 LMCD1Q9NZU5 365 aa5.47□□□□□ -1.53
HMGB1P41-201ENST00000520234 CYP26A1O43174 497 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 LMNB1P20700 586 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 PREPP48147 710 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 LIG3P49916 1009 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 FANCCQ00597 558 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 ZNF252P-AS1Q0IIN9 211 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 MESP2Q0VG99 397 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 DIEXFQ68CQ4 756 aaKnown RBP5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 LLGL2Q6P1M3 1020 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 AGMOQ6ZNB7 445 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 ERMP1Q7Z2K6 904 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 FBXL6Q8N531 539 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 UBASH3BQ8TF42 649 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 RNF34Q969K3 372 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 RUSC1Q9BVN2 902 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 TMPRSS13Q9BYE2 586 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 SUGCTQ9HAC7 445 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 CBX8Q9HC52 389 aa5.46□□□□□ -1.54
HMGB1P41-201ENST00000520234 TRIM37O94972 964 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 RAP1GAPP47736 663 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms