RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 DYNLL1P63167 89 aaKnown RBP16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 LRP2BPQ9P2M1 347 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 PCDHB15Q9Y5E8 787 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 CENPFP49454 3210 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 GPR25O00155 361 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 IRF6O14896 467 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 ENTPD3O75355 529 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 SREBF2Q12772 1141 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 DGKZQ13574 1117 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 MOGSQ13724 837 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCUBE2-205ENST00000519535 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
SCUBE2-205ENST00000519535 MAP3K10Q02779 954 aa16.6■□□□□ 0.25
SCUBE2-205ENST00000519535 CRHR2Q13324 411 aa16.6■□□□□ 0.25
SCUBE2-205ENST00000519535 SHROOM1Q2M3G4 852 aaPredicted RBP16.6■□□□□ 0.25
SCUBE2-205ENST00000519535 CFHR5Q9BXR6 569 aa16.6■□□□□ 0.25
SCUBE2-205ENST00000519535 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
SCUBE2-205ENST00000519535 JAG1P78504 1218 aa16.59■□□□□ 0.25
SCUBE2-205ENST00000519535 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
SCUBE2-205ENST00000519535 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
SCUBE2-205ENST00000519535 CSADQ9Y600 493 aa16.59■□□□□ 0.25
SCUBE2-205ENST00000519535 BRCA2P51587 3418 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 PPP4CP60510 307 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 EVX2Q03828 476 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 CCL15Q16663 113 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 DCAF15Q66K64 600 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 ERO1BQ86YB8 467 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 KIF1BPQ96EK5 621 aa16.58■□□□□ 0.24
SCUBE2-205ENST00000519535 BTBD19C9JJ37 291 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 IDH1O75874 414 aaKnown RBP16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 CYP7A1P22680 504 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 GSTO1P78417 241 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 PPIL2Q13356 520 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 MAGEB6Q8N7X4 407 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 DNAJC18Q9H819 358 aa16.57■□□□□ 0.24
SCUBE2-205ENST00000519535 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
SCUBE2-205ENST00000519535 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
SCUBE2-205ENST00000519535 LDHCP07864 332 aa16.56■□□□□ 0.24
SCUBE2-205ENST00000519535 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
SCUBE2-205ENST00000519535 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
SCUBE2-205ENST00000519535 CRBNQ96SW2 442 aa16.56■□□□□ 0.24
SCUBE2-205ENST00000519535 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 HMMRO75330 724 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 INHBEP58166 350 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 HSP90AB4PQ58FF6 505 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 TSHZ3Q63HK5 1081 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 GPAT2Q6NUI2 795 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 CTU1Q7Z7A3 348 aaKnown RBP16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 SAP30BPQ9UHR5 308 aaKnown RBP16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 LAMB1P07942 1786 aa16.55■□□□□ 0.24
SCUBE2-205ENST00000519535 FLT1P17948 1338 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 GOLIM4O00461 696 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 GTF2A2P52657 109 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 PPATQ06203 517 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 CLASRPQ8N2M8 674 aaKnown RBP16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 OTUD7AQ8TE49 926 aaPredicted RBP16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 BOLA2Q9H3K6 86 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
SCUBE2-205ENST00000519535 CCDC85CA6NKD9 419 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 FKTNO75072 461 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 PTPRAP18433 802 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 SCYL3Q8IZE3 742 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 HOOK2Q96ED9 719 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
SCUBE2-205ENST00000519535 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 TBC1D12O60347 775 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 ALDH1A1P00352 501 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 IFIT2P09913 472 aaKnown RBP16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 PDE6AP16499 860 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 CTGFP29279 349 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 ARHGAP39Q9C0H5 1083 aa16.52■□□□□ 0.24
SCUBE2-205ENST00000519535 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms