RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 LBX1P52954 281 aa23.56■■□□□ 1.36
LMNA-225ENST00000515824 SREBF2Q12772 1141 aa23.56■■□□□ 1.36
LMNA-225ENST00000515824 WRNIP1Q96S55 665 aa23.56■■□□□ 1.36
LMNA-225ENST00000515824 ELP3Q9H9T3 547 aa23.56■■□□□ 1.36
LMNA-225ENST00000515824 PRDM10Q9NQV6 1147 aa23.56■■□□□ 1.36
LMNA-225ENST00000515824 RFX7Q2KHR2 1363 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 TM4SF4P48230 202 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 VGLL4Q14135 290 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 ADGRA1Q86SQ6 560 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 CERS3Q8IU89 383 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 SH3RF3Q8TEJ3 882 aaPredicted RBP23.55■■□□□ 1.36
LMNA-225ENST00000515824 GPATCH3Q96I76 525 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 ECHDC1Q9NTX5 307 aa23.55■■□□□ 1.36
LMNA-225ENST00000515824 ZBTB47Q9UFB7 747 aaPredicted RBP23.55■■□□□ 1.36
LMNA-225ENST00000515824 INHBEP58166 350 aa23.54■■□□□ 1.36
LMNA-225ENST00000515824 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
LMNA-225ENST00000515824 HAUS7Q99871 368 aa23.54■■□□□ 1.36
LMNA-225ENST00000515824 PAG1Q9NWQ8 432 aa23.54■■□□□ 1.36
LMNA-225ENST00000515824 RNF186Q9NXI6 227 aa23.54■■□□□ 1.36
LMNA-225ENST00000515824 SAGE1Q9NXZ1 904 aa23.54■■□□□ 1.36
LMNA-225ENST00000515824 DDTLA6NHG4 134 aaPredicted RBP23.53■■□□□ 1.36
LMNA-225ENST00000515824 MANSC4A6NHS7 340 aaPredicted RBP23.53■■□□□ 1.36
LMNA-225ENST00000515824 SLC9C2Q5TAH2 1124 aa23.53■■□□□ 1.36
LMNA-225ENST00000515824 SH3BP5LQ7L8J4 393 aa23.53■■□□□ 1.36
LMNA-225ENST00000515824 EXOC6Q8TAG9 804 aa23.53■■□□□ 1.36
LMNA-225ENST00000515824 ZKSCAN4Q969J2 545 aaPredicted RBP23.53■■□□□ 1.36
LMNA-225ENST00000515824 GCC1Q96CN9 775 aa23.53■■□□□ 1.36
LMNA-225ENST00000515824 OPTNQ96CV9 577 aa23.53■■□□□ 1.36
LMNA-225ENST00000515824 TSKSQ9UJT2 592 aa23.53■■□□□ 1.36
LMNA-225ENST00000515824 TRPA1O75762 1119 aa23.52■■□□□ 1.36
LMNA-225ENST00000515824 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
LMNA-225ENST00000515824 MIGA1Q8NAN2 632 aa23.52■■□□□ 1.36
LMNA-225ENST00000515824 OSBPL5Q9H0X9 879 aaPredicted RBP23.52■■□□□ 1.36
LMNA-225ENST00000515824 ZNF112Q9UJU3 913 aa23.52■■□□□ 1.36
LMNA-225ENST00000515824 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
LMNA-225ENST00000515824 DYNLL1P63167 89 aaKnown RBP23.51■■□□□ 1.35
LMNA-225ENST00000515824 TGFBRAP1Q8WUH2 860 aa23.51■■□□□ 1.35
LMNA-225ENST00000515824 EDC3Q96F86 508 aaKnown RBP23.51■■□□□ 1.35
LMNA-225ENST00000515824 GJA5P36382 358 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 MAP3K10Q02779 954 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 ANKRD45Q5TZF3 282 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 ERO1BQ86YB8 467 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.5■■□□□ 1.351e-9■□□□□ 8.6
LMNA-225ENST00000515824 RWDD1Q9H446 243 aaPredicted RBP23.5■■□□□ 1.35
LMNA-225ENST00000515824 SNCAIPQ9Y6H5 919 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 ATRNL1Q5VV63 1379 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 MAST2Q6P0Q8 1798 aa23.5■■□□□ 1.35
LMNA-225ENST00000515824 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
LMNA-225ENST00000515824 PDE6AP16499 860 aa23.49■■□□□ 1.35
LMNA-225ENST00000515824 INPP5BP32019 993 aa23.49■■□□□ 1.35
LMNA-225ENST00000515824 DHX36Q9H2U1 1008 aaKnown RBP23.49■■□□□ 1.35
LMNA-225ENST00000515824 MYO5AQ9Y4I1 1855 aaKnown RBP23.48■■□□□ 1.35
LMNA-225ENST00000515824 TBC1D12O60347 775 aa23.48■■□□□ 1.35
LMNA-225ENST00000515824 MAPKAPK5Q8IW41 473 aa23.48■■□□□ 1.35
LMNA-225ENST00000515824 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
LMNA-225ENST00000515824 OTUD5Q96G74 571 aa23.48■■□□□ 1.35
LMNA-225ENST00000515824 ZNF532Q9HCE3 1301 aa23.48■■□□□ 1.35
LMNA-225ENST00000515824 MAGEB6P1A0A0J9YX57 407 aa23.47■■□□□ 1.35
LMNA-225ENST00000515824 ALDH1A1P00352 501 aa23.47■■□□□ 1.35
LMNA-225ENST00000515824 USP5P45974 858 aa23.47■■□□□ 1.35
LMNA-225ENST00000515824 PI4KBQ9UBF8 816 aa23.47■■□□□ 1.35
LMNA-225ENST00000515824 FLT1P17948 1338 aa23.47■■□□□ 1.35
LMNA-225ENST00000515824 TTC41PQ6P2S7 1318 aa23.47■■□□□ 1.35
LMNA-225ENST00000515824 COL2A1P02458 1487 aaPredicted RBP23.47■■□□□ 1.35
LMNA-225ENST00000515824 PHF20L1A8MW92 1017 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 ERC2O15083 957 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 GTF2A2P52657 109 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 PPATQ06203 517 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 NOL9Q5SY16 702 aaKnown RBP23.46■■□□□ 1.35
LMNA-225ENST00000515824 OTUD7BQ6GQQ9 843 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 ZSCAN25Q6NSZ9 544 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 IFNL1Q8IU54 200 aa23.46■■□□□ 1.35
LMNA-225ENST00000515824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.46■■□□□ 1.35
LMNA-225ENST00000515824 TCRBV5S4A2TA0A5A2 114 aa23.45■■□□□ 1.34
LMNA-225ENST00000515824 TESPA1A2RU30 521 aaPredicted RBP23.45■■□□□ 1.34
LMNA-225ENST00000515824 ADD2P35612 726 aa23.45■■□□□ 1.34
LMNA-225ENST00000515824 PPIL2Q13356 520 aa23.45■■□□□ 1.34
LMNA-225ENST00000515824 RIOK1Q9BRS2 568 aaKnown RBP23.45■■□□□ 1.34
LMNA-225ENST00000515824 HERC5Q9UII4 1024 aaKnown RBP23.45■■□□□ 1.34
LMNA-225ENST00000515824 OTOFQ9HC10 1997 aa23.44■■□□□ 1.34
LMNA-225ENST00000515824 TSHZ3Q63HK5 1081 aa23.44■■□□□ 1.34
LMNA-225ENST00000515824 FOXP4Q8IVH2 680 aaPredicted RBP23.44■■□□□ 1.34
LMNA-225ENST00000515824 MS4A4AQ96JQ5 239 aa23.44■■□□□ 1.34
LMNA-225ENST00000515824 DOCK2Q92608 1830 aa23.44■■□□□ 1.34
LMNA-225ENST00000515824 IRF6O14896 467 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 CTNND1O60716 968 aaKnown RBP23.43■■□□□ 1.34
LMNA-225ENST00000515824 GLRX3O76003 335 aaKnown RBP23.43■■□□□ 1.34
LMNA-225ENST00000515824 HLA-DOAP06340 250 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 SLURP2P0DP57 97 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 UBE3CQ15386 1083 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 SCYL3Q8IZE3 742 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 CRNKL1Q9BZJ0 848 aaKnown RBP23.43■■□□□ 1.34
LMNA-225ENST00000515824 PICK1Q9NRD5 415 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 PALD1Q9ULE6 856 aa23.43■■□□□ 1.34
LMNA-225ENST00000515824 CCL15-CCL14A0A0B4J2E2 113 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 TBC1D8O95759 1140 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 CETPP11597 493 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 MX1P20591 662 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 SNAPC2Q13487 334 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 CCL15Q16663 113 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms