RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 HTTP42858 3142 aa17.6■□□□□ 0.41
GABRB1-203ENST00000509366 RFX7Q2KHR2 1363 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 PDHXO00330 501 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 CXCL11O14625 94 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 GNRH1P01148 92 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 ARID4AP29374 1257 aaPredicted RBP17.59■□□□□ 0.41
GABRB1-203ENST00000509366 LACTBP83111 547 aaPredicted RBP17.59■□□□□ 0.41
GABRB1-203ENST00000509366 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
GABRB1-203ENST00000509366 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
GABRB1-203ENST00000509366 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
GABRB1-203ENST00000509366 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 LRP2BPQ9P2M1 347 aa17.59■□□□□ 0.41
GABRB1-203ENST00000509366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.59■□□□□ 0.41
GABRB1-203ENST00000509366 ATRNL1Q5VV63 1379 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
GABRB1-203ENST00000509366 POLA2Q14181 598 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 CCDC158Q5M9N0 1113 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 PI16Q6UXB8 463 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 PARK7Q99497 189 aaKnown RBP17.58■□□□□ 0.4
GABRB1-203ENST00000509366 GPR108Q9NPR9 543 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 PTCH2Q9Y6C5 1203 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
GABRB1-203ENST00000509366 PHF20L1A8MW92 1017 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
GABRB1-203ENST00000509366 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
GABRB1-203ENST00000509366 PRMT2P55345 433 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 CAP1Q01518 475 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 SH3BP5LQ7L8J4 393 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 FASTKD5Q7L8L6 764 aaKnown RBP17.57■□□□□ 0.4
GABRB1-203ENST00000509366 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
GABRB1-203ENST00000509366 NSUN4Q96CB9 384 aaKnown RBP17.57■□□□□ 0.4
GABRB1-203ENST00000509366 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
GABRB1-203ENST00000509366 POTEFA5A3E0 1075 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 DDTLA6NHG4 134 aaPredicted RBP17.56■□□□□ 0.4
GABRB1-203ENST00000509366 PTPRAP18433 802 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 MCAMP43121 646 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 RHBDL3P58872 404 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 MAP3K10Q02779 954 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 TNNI3KQ59H18 835 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 C17orf99Q6UX52 265 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 ZNF333Q96JL9 665 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 CPA4Q9UI42 421 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 FPGT-TNNI3KV9GXZ4 949 aa17.56■□□□□ 0.4
GABRB1-203ENST00000509366 BAG3O95817 575 aa17.55■□□□□ 0.4
GABRB1-203ENST00000509366 HOXD10P28358 340 aa17.55■□□□□ 0.4
GABRB1-203ENST00000509366 ZNF384Q8TF68 577 aa17.55■□□□□ 0.4
GABRB1-203ENST00000509366 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
GABRB1-203ENST00000509366 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
GABRB1-203ENST00000509366 RBBP6Q7Z6E9 1792 aaKnown RBP17.54■□□□□ 0.4
GABRB1-203ENST00000509366 A0A0G2JLL6 359 aaPredicted RBP17.54■□□□□ 0.4
GABRB1-203ENST00000509366 TBC1D12O60347 775 aa17.54■□□□□ 0.4
GABRB1-203ENST00000509366 PSMC4P43686 418 aa17.54■□□□□ 0.4
GABRB1-203ENST00000509366 MOGSQ13724 837 aa17.54■□□□□ 0.4
GABRB1-203ENST00000509366 NAA16Q6N069 864 aaPredicted RBP17.54■□□□□ 0.4
GABRB1-203ENST00000509366 PRRT2Q7Z6L0 340 aaPredicted RBP17.54■□□□□ 0.4
GABRB1-203ENST00000509366 TEX11Q8IYF3 940 aa17.54■□□□□ 0.4
GABRB1-203ENST00000509366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.4
GABRB1-203ENST00000509366 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
GABRB1-203ENST00000509366 SLC34A2O95436 690 aa17.53■□□□□ 0.4
GABRB1-203ENST00000509366 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
GABRB1-203ENST00000509366 PLCG2P16885 1265 aa17.53■□□□□ 0.4
GABRB1-203ENST00000509366 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
GABRB1-203ENST00000509366 GADL1Q6ZQY3 521 aa17.53■□□□□ 0.4
GABRB1-203ENST00000509366 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
GABRB1-203ENST00000509366 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
GABRB1-203ENST00000509366 DOCK1Q14185 1865 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 ADGRA2Q96PE1 1338 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 COL2A1P02458 1487 aaPredicted RBP17.52■□□□□ 0.4
GABRB1-203ENST00000509366 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 ZBTB7BO15156 539 aaPredicted RBP17.52■□□□□ 0.4
GABRB1-203ENST00000509366 IGSF3O75054 1194 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
GABRB1-203ENST00000509366 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 ZNF512BQ96KM6 892 aaPredicted RBP17.52■□□□□ 0.4
GABRB1-203ENST00000509366 TRIM47Q96LD4 638 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 OSBPL5Q9H0X9 879 aaPredicted RBP17.52■□□□□ 0.4
GABRB1-203ENST00000509366 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
GABRB1-203ENST00000509366 NOP58Q9Y2X3 529 aaKnown RBP17.52■□□□□ 0.4
GABRB1-203ENST00000509366 CENPFP49454 3210 aa17.52■□□□□ 0.39
GABRB1-203ENST00000509366 CYP2C8P10632 490 aa17.51■□□□□ 0.39
GABRB1-203ENST00000509366 RLBP1P12271 317 aa17.51■□□□□ 0.39
GABRB1-203ENST00000509366 EN2P19622 333 aaPredicted RBP17.51■□□□□ 0.39
GABRB1-203ENST00000509366 RAET1EQ8TD07 263 aa17.51■□□□□ 0.39
GABRB1-203ENST00000509366 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
GABRB1-203ENST00000509366 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
GABRB1-203ENST00000509366 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
GABRB1-203ENST00000509366 ZSWIM8A7E2V4 1837 aa17.5■□□□□ 0.39
GABRB1-203ENST00000509366 MYCP01106 439 aaPredicted RBP17.5■□□□□ 0.39
GABRB1-203ENST00000509366 SLURP2P0DP57 97 aa17.5■□□□□ 0.39
GABRB1-203ENST00000509366 MS4A1P11836 297 aa17.5■□□□□ 0.39
GABRB1-203ENST00000509366 FCGRTP55899 365 aa17.5■□□□□ 0.39
GABRB1-203ENST00000509366 SH3RF3Q8TEJ3 882 aaPredicted RBP17.5■□□□□ 0.39
GABRB1-203ENST00000509366 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
GABRB1-203ENST00000509366 DHX36Q9H2U1 1008 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms