RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
UBE2D3-227ENST00000508818 GAKO14976 1311 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 MECOMQ03112 1051 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 PICALMQ13492 652 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 ZFPM1Q8IX07 1006 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 IDI2Q9BXS1 227 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
UBE2D3-227ENST00000508818 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 MS4A1P11836 297 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 ZNF112Q9UJU3 913 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
UBE2D3-227ENST00000508818 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 GPR75-ASB3A0A0A6YYF3 556 aa12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 BTBD19C9JJ37 291 aa12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 ARID4AP29374 1257 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
UBE2D3-227ENST00000508818 MYH2Q9UKX2 1941 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 TLR2O60603 784 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 BAG3O95817 575 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 MCAMP43121 646 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 NOL9Q5SY16 702 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 PI16Q6UXB8 463 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 SCYL3Q8IZE3 742 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 DBNDD2Q9BQY9 259 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
UBE2D3-227ENST00000508818 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 PDHXO00330 501 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 CXCL11O14625 94 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 RLBP1P12271 317 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 NAA16Q6N069 864 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 NBPF11Q86T75 865 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
UBE2D3-227ENST00000508818 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 CTNND1O60716 968 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 PLCG2P16885 1265 aa12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 RHBDL3P58872 404 aa12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 SH3BP5LQ7L8J4 393 aa12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 FASTKD5Q7L8L6 764 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 ERC1Q8IUD2 1116 aa12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 DDX4Q9NQI0 724 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-227ENST00000508818 LAMB1P07942 1786 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 GNRH1P01148 92 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 PTPRAP18433 802 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 HOXD10P28358 340 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 SLC9C1Q4G0N8 1177 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 HSP90AB4PQ58FF6 505 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
UBE2D3-227ENST00000508818 TBC1D12O60347 775 aa12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 PRMT2P55345 433 aa12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 MAP3K10Q02779 954 aa12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 SH3RF3Q8TEJ3 882 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 ZNF384Q8TF68 577 aa12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 ZNF512BQ96KM6 892 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 OSBPL5Q9H0X9 879 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 CHMP4BQ9H444 224 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-227ENST00000508818 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.446e-12■■□□□ 12.2
UBE2D3-227ENST00000508818 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 IGSF3O75054 1194 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 HMMRO75330 724 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 CYP2E1P05181 493 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 ZAP70P43403 619 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 PSMC4P43686 418 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 SLC4A8Q2Y0W8 1093 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 C17orf99Q6UX52 265 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 AACSQ86V21 672 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 ARMC5Q96C12 935 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 EAF2Q96CJ1 260 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms