RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 SREBF2Q12772 1141 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 VGLL4Q14135 290 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 SH3BP5LQ7L8J4 393 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 ADGRA1Q86SQ6 560 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
TRIO-211ENST00000508343 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 MAGEB6Q8N7X4 407 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 SH3RF3Q8TEJ3 882 aaPredicted RBP18.32■□□□□ 0.52
TRIO-211ENST00000508343 WRNIP1Q96S55 665 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 ELP3Q9H9T3 547 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 SAGE1Q9NXZ1 904 aa18.32■□□□□ 0.52
TRIO-211ENST00000508343 DDTLA6NHG4 134 aaPredicted RBP18.31■□□□□ 0.52
TRIO-211ENST00000508343 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
TRIO-211ENST00000508343 GOLIM4O00461 696 aa18.31■□□□□ 0.52
TRIO-211ENST00000508343 TRPA1O75762 1119 aa18.31■□□□□ 0.52
TRIO-211ENST00000508343 INHBEP58166 350 aa18.31■□□□□ 0.52
TRIO-211ENST00000508343 DNAJC2Q99543 621 aaKnown RBP18.31■□□□□ 0.52
TRIO-211ENST00000508343 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
TRIO-211ENST00000508343 ZNF112Q9UJU3 913 aa18.31■□□□□ 0.52
TRIO-211ENST00000508343 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
TRIO-211ENST00000508343 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
TRIO-211ENST00000508343 ZKSCAN4Q969J2 545 aaPredicted RBP18.3■□□□□ 0.52
TRIO-211ENST00000508343 OPTNQ96CV9 577 aa18.3■□□□□ 0.52
TRIO-211ENST00000508343 HAUS7Q99871 368 aa18.3■□□□□ 0.52
TRIO-211ENST00000508343 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
TRIO-211ENST00000508343 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
TRIO-211ENST00000508343 GJA5P36382 358 aa18.29■□□□□ 0.52
TRIO-211ENST00000508343 MAP3K10Q02779 954 aa18.29■□□□□ 0.52
TRIO-211ENST00000508343 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
TRIO-211ENST00000508343 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
TRIO-211ENST00000508343 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
TRIO-211ENST00000508343 SNCAIPQ9Y6H5 919 aa18.29■□□□□ 0.52
TRIO-211ENST00000508343 MAST2Q6P0Q8 1798 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 INPP5BP32019 993 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 DYNLL1P63167 89 aaKnown RBP18.28■□□□□ 0.52
TRIO-211ENST00000508343 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 TGFBRAP1Q8WUH2 860 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
TRIO-211ENST00000508343 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
TRIO-211ENST00000508343 SPDYE5A6NIY4 337 aa18.27■□□□□ 0.52
TRIO-211ENST00000508343 PDE6AP16499 860 aa18.27■□□□□ 0.52
TRIO-211ENST00000508343 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
TRIO-211ENST00000508343 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
TRIO-211ENST00000508343 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
TRIO-211ENST00000508343 GCC1Q96CN9 775 aa18.27■□□□□ 0.52
TRIO-211ENST00000508343 OTOFQ9HC10 1997 aa18.26■□□□□ 0.51
TRIO-211ENST00000508343 PHF20L1A8MW92 1017 aa18.26■□□□□ 0.51
TRIO-211ENST00000508343 TBC1D12O60347 775 aa18.26■□□□□ 0.51
TRIO-211ENST00000508343 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
TRIO-211ENST00000508343 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
TRIO-211ENST00000508343 OTUD5Q96G74 571 aa18.26■□□□□ 0.51
TRIO-211ENST00000508343 DHX36Q9H2U1 1008 aaKnown RBP18.26■□□□□ 0.51
TRIO-211ENST00000508343 ZBTB47Q9UFB7 747 aaPredicted RBP18.26■□□□□ 0.51
TRIO-211ENST00000508343 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
TRIO-211ENST00000508343 TESPA1A2RU30 521 aaPredicted RBP18.25■□□□□ 0.51
TRIO-211ENST00000508343 ALDH1A1P00352 501 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 GTF2A2P52657 109 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 PPATQ06203 517 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 ANKRD45Q5TZF3 282 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 MS4A4AQ96JQ5 239 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 RWDD1Q9H446 243 aaPredicted RBP18.25■□□□□ 0.51
TRIO-211ENST00000508343 DOCK2Q92608 1830 aa18.25■□□□□ 0.51
TRIO-211ENST00000508343 FLT1P17948 1338 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 ZNF532Q9HCE3 1301 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 PPIL2Q13356 520 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 OTUD7BQ6GQQ9 843 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 RIOK1Q9BRS2 568 aaKnown RBP18.24■□□□□ 0.51
TRIO-211ENST00000508343 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIO-211ENST00000508343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIO-211ENST00000508343 PI4KBQ9UBF8 816 aa18.24■□□□□ 0.51
TRIO-211ENST00000508343 IGF2BP3O00425 579 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRIO-211ENST00000508343 CTNND1O60716 968 aaKnown RBP18.23■□□□□ 0.51
TRIO-211ENST00000508343 TBC1D8O95759 1140 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 ADD2P35612 726 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 USP5P45974 858 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 TNS4Q8IZW8 715 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 CFHR5Q9BXR6 569 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
TRIO-211ENST00000508343 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
TRIO-211ENST00000508343 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 IRF6O14896 467 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 SNAPC2Q13487 334 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 CCL15Q16663 113 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 TSHZ3Q63HK5 1081 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
TRIO-211ENST00000508343 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 PTPN18Q99952 460 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
TRIO-211ENST00000508343 ERC2O15083 957 aa18.21■□□□□ 0.51
TRIO-211ENST00000508343 CETPP11597 493 aa18.21■□□□□ 0.51
TRIO-211ENST00000508343 UBE3CQ15386 1083 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms