RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KCNH4Q9UQ05 1017 aa16.06■□□□□ 0.16
HMGCS1-205ENST00000508319 PTPN22Q9Y2R2 807 aa16.06■□□□□ 0.16
HMGCS1-205ENST00000508319 PTPRFP10586 1907 aa16.06■□□□□ 0.16
HMGCS1-205ENST00000508319 ENTPD3O75355 529 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 RLBP1P12271 317 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 MCAMP43121 646 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.164e-13■□□□□ 11.1
HMGCS1-205ENST00000508319 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 SPATA5Q8NB90 893 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 DDX4Q9NQI0 724 aaKnown RBP16.05■□□□□ 0.16
HMGCS1-205ENST00000508319 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 PHIPQ8WWQ0 1821 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 PHF20L1A8MW92 1017 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 TLR2O60603 784 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 RHBDL3P58872 404 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
HMGCS1-205ENST00000508319 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 PICALMQ13492 652 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 MOGSQ13724 837 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 ARMC5Q96C12 935 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
HMGCS1-205ENST00000508319 ADGRA2Q96PE1 1338 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 CDK5RAP2Q96SN8 1893 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 SLURP2P0DP57 97 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 ATP8B2P98198 1209 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 MAP3K10Q02779 954 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 TNNI3KQ59H18 835 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.16
HMGCS1-205ENST00000508319 COL2A1P02458 1487 aaPredicted RBP16.02■□□□□ 0.15
HMGCS1-205ENST00000508319 SIPA1L1O43166 1804 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 FOCADQ5VW36 1801 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 ZBTB7BO15156 539 aaPredicted RBP16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 UQCRFS1P1P0C7P4 283 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 LACTBP83111 547 aaPredicted RBP16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 ZSCAN29Q8IWY8 852 aaPredicted RBP16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 SCYL3Q8IZE3 742 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 ARHGAP39Q9C0H5 1083 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 RAI14Q9P0K7 980 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
HMGCS1-205ENST00000508319 POTEFA5A3E0 1075 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 PDHXO00330 501 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
HMGCS1-205ENST00000508319 PTPRAP18433 802 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 GSTO1P78417 241 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 C17orf99Q6UX52 265 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 DBNDD2Q9BQY9 259 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
HMGCS1-205ENST00000508319 CXCL11O14625 94 aa15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 SURF6O75683 361 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 OS9Q13438 667 aaPredicted RBP15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 ARHGEF6Q15052 776 aa15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 ZNF333Q96JL9 665 aa15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 PICK1Q9NRD5 415 aa15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 NOP58Q9Y2X3 529 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-205ENST00000508319 A0A0G2JLL6 359 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 CTNND1O60716 968 aaKnown RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 MAP4K4O95819 1239 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 LDHCP07864 332 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 TTC39AQ5SRH9 613 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 GPAT2Q6NUI2 795 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 PRRT2Q7Z6L0 340 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 OSBPL5Q9H0X9 879 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 SNRKQ9NRH2 765 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 LRP2BPQ9P2M1 347 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 CPA4Q9UI42 421 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 AFG3L2Q9Y4W6 797 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 ZHX2Q9Y6X8 837 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 LOC285556D6RIA3 1793 aa15.98■□□□□ 0.15
HMGCS1-205ENST00000508319 MGAMO43451 1857 aa15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 CTGFP29279 349 aa15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 CCDC158Q5M9N0 1113 aa15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 ZNF512BQ96KM6 892 aaPredicted RBP15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 PARK7Q99497 189 aaKnown RBP15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
HMGCS1-205ENST00000508319 TBC1D12O60347 775 aa15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 KIF22Q14807 665 aa15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 SLC9C1Q4G0N8 1177 aa15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 PRPF38BQ5VTL8 546 aaKnown RBP15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 ADGRA1Q86SQ6 560 aa15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 TEX11Q8IYF3 940 aa15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 SH3RF3Q8TEJ3 882 aaPredicted RBP15.96■□□□□ 0.15
HMGCS1-205ENST00000508319 GNRH1P01148 92 aa15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 CYP2C8P10632 490 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms