RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 LINC00116Q8NCU8 138 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 COL4A3BPQ9Y5P4 624 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 FER1L6Q2WGJ9 1857 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 TCRBV5S4A2TA0A5A2 114 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 TM4SF1P30408 202 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 MAPK8P45983 427 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 COL19A1Q14993 1142 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 RNF34Q969K3 372 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 MYD88Q99836 296 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 MAP10Q9P2G4 905 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.19□□□□□ -1.26
SCLT1-207ENST00000506233 ZBTB1Q9Y2K1 713 aa7.19□□□□□ -1.26
SCLT1-207ENST00000506233 CTSHP09668 335 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 PCDH12Q9NPG4 1184 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 GPR182O15218 404 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 TFCP2Q12800 502 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 PIP4P2Q8N4L2 257 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 KANSL2Q9H9L4 492 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
SCLT1-207ENST00000506233 PNMA3Q9UL41 463 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 DENND2AQ9ULE3 1009 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 NEDD4P46934 1319 aa7.18□□□□□ -1.26
SCLT1-207ENST00000506233 LDHBP07195 334 aaKnown RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 UBTFL1P0CB47 393 aaPredicted RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 CPA1P15085 419 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 TOB2Q14106 344 aaPredicted RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 C1orf141Q5JVX7 400 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SIX5Q8N196 739 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 MAP4K1Q92918 833 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SGSM3Q96HU1 749 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SEC62Q99442 399 aaKnown RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 TTC41PQ6P2S7 1318 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 DSC3Q14574 896 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 PLEKHG6Q3KR16 790 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 TMC4Q7Z404 712 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 NLRP10Q86W26 655 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 RNF135Q8IUD6 432 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 TNPO1Q92973 898 aaKnown RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 TATDN2Q93075 761 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 ABCC12Q96J65 1359 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SMIM22K7EJ46 135 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 FGRP09769 529 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 ZNF76P36508 570 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 TEFQ10587 303 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 APBB1IPQ7Z5R6 666 aaPredicted RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 AGXT2Q9BYV1 514 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 IRF2BPLQ9H1B7 796 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 METTL14Q9HCE5 456 aaKnown RBP7.17□□□□□ -1.26
SCLT1-207ENST00000506233 PRDM11Q9NQV5 511 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 LRRC4BQ9NT99 713 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 PRR12Q9ULL5 1215 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 CDHR2Q9BYE9 1310 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SALL1Q9NSC2 1324 aa7.17□□□□□ -1.26
SCLT1-207ENST00000506233 SCN9AQ15858 1988 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 RFX7Q2KHR2 1363 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 NTSR2O95665 410 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 USP46P62068 366 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TNNI3KQ59H18 835 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 GORABQ5T7V8 394 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 VPS53Q5VIR6 699 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 COLQQ9Y215 455 aaPredicted RBP7.16□□□□□ -1.26
SCLT1-207ENST00000506233 FPGT-TNNI3KV9GXZ4 949 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 COL4A5P29400 1685 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 DAB2P98082 770 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TTLL11Q8NHH1 800 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 GPT2Q8TD30 523 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 RAPGEF4Q8WZA2 1011 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 CCDC87Q9NVE4 849 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 RTL9Q8NET4 1388 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 CCDC88AQ3V6T2 1871 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 MAP3K15Q6ZN16 1313 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 SORBS3O60504 671 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 ADORA1P30542 326 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 AIMP1Q12904 312 aaKnown RBP7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TCIRG1Q13488 830 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TOM1L2Q6ZVM7 507 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 FILIP1Q7Z7B0 1213 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TSEN2Q8NCE0 465 aaKnown RBP7.16□□□□□ -1.26
SCLT1-207ENST00000506233 FKBPLQ9UIM3 349 aa7.16□□□□□ -1.26
SCLT1-207ENST00000506233 RBBP6Q7Z6E9 1792 aaKnown RBP7.16□□□□□ -1.26
SCLT1-207ENST00000506233 TAF5LO75529 589 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 DBNDD2Q9BQY9 259 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 STK31Q9BXU1 1019 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 CTDNEP1O95476 244 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 MPSTP25325 297 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 ANP32AP39687 249 aaKnown RBP7.15□□□□□ -1.26
SCLT1-207ENST00000506233 EVX2Q03828 476 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 PNMA1Q8ND90 353 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 HAUS7Q99871 368 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 VTI1BQ9UEU0 232 aa7.15□□□□□ -1.26
SCLT1-207ENST00000506233 THRAP3Q9Y2W1 955 aaKnown RBP7.15□□□□□ -1.26
SCLT1-207ENST00000506233 G3V3G9 751 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 ATP5JP18859 108 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 KCNQ4P56696 695 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 CABP4P57796 275 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 EHHADHQ08426 723 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 UBE3BQ7Z3V4 1068 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms