RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 GRK4P32298 578 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 RGS3P49796 1198 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 MTFR1Q15390 333 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 TRIM47Q96LD4 638 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 CPA4Q9UI42 421 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 TRIOBPQ9H2D6 2365 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 GJB1P08034 283 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 UBTFL1P0CB47 393 aaPredicted RBP13.14□□□□□ -0.31
CPNE4-206ENST00000505957 OSBPP22059 807 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 INPP5BP32019 993 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 GJA8P48165 433 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 MOGSQ13724 837 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
CPNE4-206ENST00000505957 NOL9Q5SY16 702 aaKnown RBP13.14□□□□□ -0.31
CPNE4-206ENST00000505957 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 SKAP1Q86WV1 359 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
CPNE4-206ENST00000505957 CXCL11O14625 94 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 FMNL1O95466 1100 aaPredicted RBP13.13□□□□□ -0.31
CPNE4-206ENST00000505957 CAPN2P17655 700 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 MTX1Q13505 466 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 DPF3Q92784 378 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
CPNE4-206ENST00000505957 HTATIP2Q9BUP3 242 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
CPNE4-206ENST00000505957 BCRP11274 1271 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 CCL5P13501 91 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 UBXN2AP68543 259 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 POLA2Q14181 598 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 CDC42EP5Q6NZY7 148 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 LPIN2Q92539 896 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
CPNE4-206ENST00000505957 DAGLAQ9Y4D2 1042 aa13.12□□□□□ -0.31
CPNE4-206ENST00000505957 SLC5A1P13866 664 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 FCGRTP55899 365 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
CPNE4-206ENST00000505957 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
CPNE4-206ENST00000505957 EYA2O00167 538 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 ZBTB22O15209 634 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 PRKCZQ05513 592 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 TCP10Q12799 353 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 NFIAQ12857 509 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
CPNE4-206ENST00000505957 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 SLC45A1Q9Y2W3 748 aa13.1□□□□□ -0.31
CPNE4-206ENST00000505957 A0A0G2JLL6 359 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-206ENST00000505957 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-206ENST00000505957 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-206ENST00000505957 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 PRRT2Q7Z6L0 340 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-206ENST00000505957 PXYLP1Q8TE99 480 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 U2AF1L4Q8WU68 220 aaKnown RBP13.09□□□□□ -0.31
CPNE4-206ENST00000505957 LNPKQ9C0E8 428 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 USP40Q9NVE5 1235 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-206ENST00000505957 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
CPNE4-206ENST00000505957 PHF20L1A8MW92 1017 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 SGPL1O95470 568 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 LDHBP07195 334 aaKnown RBP13.08□□□□□ -0.32
CPNE4-206ENST00000505957 CYP2C8P10632 490 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 PRDX5P30044 214 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 IDI2Q9BXS1 227 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 GNL3LQ9NVN8 582 aaKnown RBP13.08□□□□□ -0.32
CPNE4-206ENST00000505957 ZHX2Q9Y6X8 837 aa13.08□□□□□ -0.32
CPNE4-206ENST00000505957 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 SEMA3EO15041 775 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 RAB11FIP3O75154 756 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 ENTPD3O75355 529 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 FARP2O94887 1054 aaPredicted RBP13.07□□□□□ -0.32
CPNE4-206ENST00000505957 PTPRAP18433 802 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 IRF5Q13568 498 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 UNC93B1Q9H1C4 597 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 PICK1Q9NRD5 415 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
CPNE4-206ENST00000505957 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 GABRQQ9UN88 632 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
CPNE4-206ENST00000505957 ADCY3O60266 1144 aa13.06□□□□□ -0.32
CPNE4-206ENST00000505957 CIAO1O76071 339 aa13.06□□□□□ -0.32
CPNE4-206ENST00000505957 FLT3LGP49771 235 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms