RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 ZNF333Q96JL9 665 aa21.1■□□□□ 0.97
UBE2D3-213ENST00000502690 ZCCHC17Q9NP64 241 aaKnown RBP21.1■□□□□ 0.97
UBE2D3-213ENST00000502690 CPA4Q9UI42 421 aa21.1■□□□□ 0.97
UBE2D3-213ENST00000502690 MROH7-TTC4A0A0A0MT08 1334 aa21.09■□□□□ 0.97
UBE2D3-213ENST00000502690 MECOMQ03112 1051 aa21.09■□□□□ 0.97
UBE2D3-213ENST00000502690 TBC1D9Q6ZT07 1266 aa21.09■□□□□ 0.97
UBE2D3-213ENST00000502690 HMG20BQ9P0W2 317 aa21.09■□□□□ 0.97
UBE2D3-213ENST00000502690 PDHXO00330 501 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 MYCP01106 439 aaPredicted RBP21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 RHBDL3P58872 404 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 PICALMQ13492 652 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 C17orf99Q6UX52 265 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 ANKRD23Q86SG2 305 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 ZGPATQ8N5A5 531 aaKnown RBP21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 TMEM57Q8N5G2 664 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 NEUROD6Q96NK8 337 aa21.08■□□□□ 0.97
UBE2D3-213ENST00000502690 FOCADQ5VW36 1801 aa21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 ENTPD3O75355 529 aa21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 GNAI2P04899 355 aa21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 MVPQ14764 893 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 GPAT2Q6NUI2 795 aa21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 SH3TC2Q8TF17 1288 aa21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 FAM163AQ96GL9 167 aaPredicted RBP21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 AKAP2Q9Y2D5 859 aa21.07■□□□□ 0.96
UBE2D3-213ENST00000502690 SLC9C1Q4G0N8 1177 aa21.06■□□□□ 0.96
UBE2D3-213ENST00000502690 CCDC84Q86UT8 332 aaPredicted RBP21.06■□□□□ 0.96
UBE2D3-213ENST00000502690 GPR75-ASB3A0A0A6YYF3 556 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 FAM196BA6NMK8 535 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 IPO8O15397 1037 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 MCAMP43121 646 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 SCYL3Q8IZE3 742 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 SPATA5Q8NB90 893 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 TRIM47Q96LD4 638 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 LOC285556D6RIA3 1793 aa21.05■□□□□ 0.96
UBE2D3-213ENST00000502690 CYP2C8P10632 490 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 PTPRAP18433 802 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 ARID4AP29374 1257 aaPredicted RBP21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 MAP3K10Q02779 954 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 ERICH6Q7L0X2 663 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 ZSCAN29Q8IWY8 852 aaPredicted RBP21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 NSUN4Q96CB9 384 aaKnown RBP21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 ZHX2Q9Y6X8 837 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 DOCK3Q8IZD9 2030 aa21.04■□□□□ 0.96
UBE2D3-213ENST00000502690 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
UBE2D3-213ENST00000502690 A0A0G2JLL6 359 aaPredicted RBP21.02■□□□□ 0.96
UBE2D3-213ENST00000502690 CXCL11O14625 94 aa21.02■□□□□ 0.96
UBE2D3-213ENST00000502690 RLBP1P12271 317 aa21.02■□□□□ 0.96
UBE2D3-213ENST00000502690 POLA2Q14181 598 aa21.02■□□□□ 0.96
UBE2D3-213ENST00000502690 PRRT2Q7Z6L0 340 aaPredicted RBP21.02■□□□□ 0.96
UBE2D3-213ENST00000502690 AFG3L2Q9Y4W6 797 aa21.02■□□□□ 0.96
UBE2D3-213ENST00000502690 BCRP11274 1271 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 OSBPP22059 807 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 PSMC4P43686 418 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 KIF22Q14807 665 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 ARHGEF6Q15052 776 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
UBE2D3-213ENST00000502690 G3BP1Q13283 466 aaKnown RBP eCLIP21■□□□□ 0.95
UBE2D3-213ENST00000502690 RRP1BQ14684 758 aaKnown RBP21■□□□□ 0.95
UBE2D3-213ENST00000502690 GORABQ5T7V8 394 aa21■□□□□ 0.95
UBE2D3-213ENST00000502690 SLF2Q8IX21 1173 aa21■□□□□ 0.95
UBE2D3-213ENST00000502690 MIER1Q8N108 512 aa21■□□□□ 0.95
UBE2D3-213ENST00000502690 DBNDD2Q9BQY9 259 aa21■□□□□ 0.95
UBE2D3-213ENST00000502690 PICK1Q9NRD5 415 aa21■□□□□ 0.95
UBE2D3-213ENST00000502690 RAI14Q9P0K7 980 aa21■□□□□ 0.95
UBE2D3-213ENST00000502690 COL2A1P02458 1487 aaPredicted RBP21■□□□□ 0.95
UBE2D3-213ENST00000502690 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
UBE2D3-213ENST00000502690 MTFR1Q15390 333 aa20.99■□□□□ 0.95
UBE2D3-213ENST00000502690 SSH3Q8TE77 659 aa20.99■□□□□ 0.95
UBE2D3-213ENST00000502690 PARK7Q99497 189 aaKnown RBP20.99■□□□□ 0.95
UBE2D3-213ENST00000502690 TMEM106CQ9BVX2 250 aa20.99■□□□□ 0.95
UBE2D3-213ENST00000502690 SRRDQ9UH36 339 aa20.99■□□□□ 0.95
UBE2D3-213ENST00000502690 TRIM75PA6NK02 468 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 SLC4A8Q2Y0W8 1093 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 TNNI3KQ59H18 835 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 GADL1Q6ZQY3 521 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 ADGRA1Q86SQ6 560 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 NBPF11Q86T75 865 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 SH3RF3Q8TEJ3 882 aaPredicted RBP20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 OSBPL5Q9H0X9 879 aaPredicted RBP20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 FPGT-TNNI3KV9GXZ4 949 aa20.98■□□□□ 0.95
UBE2D3-213ENST00000502690 CTNND1O60716 968 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 GNRH1P01148 92 aa20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 PRKCZQ05513 592 aa20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 SHISA4Q96DD7 197 aa20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 GABRQQ9UN88 632 aa20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 MYPNQ86TC9 1320 aa20.97■□□□□ 0.95
UBE2D3-213ENST00000502690 CEP290O15078 2479 aa20.96■□□□□ 0.95
UBE2D3-213ENST00000502690 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
UBE2D3-213ENST00000502690 FMNL1O95466 1100 aaPredicted RBP20.96■□□□□ 0.95
UBE2D3-213ENST00000502690 ATP8B2P98198 1209 aa20.96■□□□□ 0.95
UBE2D3-213ENST00000502690 TREML2Q5T2D2 321 aa20.96■□□□□ 0.95
UBE2D3-213ENST00000502690 MYH1P12882 1939 aa20.96■□□□□ 0.95
UBE2D3-213ENST00000502690 TBC1D12O60347 775 aa20.95■□□□□ 0.94
UBE2D3-213ENST00000502690 CYP2E1P05181 493 aaPredicted RBP20.95■□□□□ 0.94
UBE2D3-213ENST00000502690 UQCRFS1P1P0C7P4 283 aa20.95■□□□□ 0.94
UBE2D3-213ENST00000502690 PRMT2P55345 433 aa20.95■□□□□ 0.94
UBE2D3-213ENST00000502690 GSTO1P78417 241 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms