RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CEMIPQ8WUJ3 1361 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.11□□□□□ -1.27
FXN-205ENST00000498653 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.11□□□□□ -1.27
FXN-205ENST00000498653 GRXCR2A6NFK2 248 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 PPP1R12BO60237 982 aaPredicted RBP7.11□□□□□ -1.27
FXN-205ENST00000498653 SASH1O94885 1247 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 FCGRTP55899 365 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 SKIV2LQ15477 1246 aaKnown RBP7.11□□□□□ -1.27
FXN-205ENST00000498653 HLFQ16534 295 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 AMOTQ4VCS5 1084 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 APOBEC3FQ8IUX4 373 aaKnown RBP7.11□□□□□ -1.27
FXN-205ENST00000498653 ANKRD13AQ8IZ07 590 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 SIN3AQ96ST3 1273 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 EPAS1Q99814 870 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 PBX4Q9BYU1 374 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 COG5Q9UP83 839 aa7.11□□□□□ -1.27
FXN-205ENST00000498653 COL4A3Q01955 1670 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 USP2O75604 605 aaPredicted RBP7.1□□□□□ -1.27
FXN-205ENST00000498653 EMP3P54852 163 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 TRIM32Q13049 653 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 PPP4R3BQ5MIZ7 849 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 RIC3Q7Z5B4 369 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 FAM178BQ8IXR5 827 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 DDX12PQ92771 950 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 FBXW7Q969H0 707 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 PRRX2Q99811 253 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 NYXQ9GZU5 481 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 LGR6Q9HBX8 967 aa7.1□□□□□ -1.27
FXN-205ENST00000498653 TEP1Q99973 2627 aaKnown RBP7.1□□□□□ -1.27
FXN-205ENST00000498653 UBN2Q6ZU65 1347 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 WDHD1O75717 1129 aaPredicted RBP7.09□□□□□ -1.27
FXN-205ENST00000498653 BCRP11274 1271 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 TNNT2P45379 298 aaPredicted RBP7.09□□□□□ -1.27
FXN-205ENST00000498653 IREB2P48200 963 aaKnown RBP7.09□□□□□ -1.27
FXN-205ENST00000498653 EIF4A2Q14240 407 aaKnown RBP7.09□□□□□ -1.27
FXN-205ENST00000498653 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.27
FXN-205ENST00000498653 TYW1BQ6NUM6 668 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 ZNF454Q8N9F8 522 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 DEFB129Q9H1M3 183 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 PRKAG2Q9UGJ0 569 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 POLLQ9UGP5 575 aa7.09□□□□□ -1.27
FXN-205ENST00000498653 EP300Q09472 2414 aaPredicted RBP7.09□□□□□ -1.27
FXN-205ENST00000498653 LOC400499M0QZD8 3231 aa7.08□□□□□ -1.28
FXN-205ENST00000498653 PLXNB2O15031 1838 aa7.08□□□□□ -1.28
FXN-205ENST00000498653 ANKRD17O75179 2603 aaKnown RBP7.08□□□□□ -1.28
FXN-205ENST00000498653 BBOX1O75936 387 aa7.08□□□□□ -1.28
FXN-205ENST00000498653 MLLT3P42568 568 aaPredicted RBP7.08□□□□□ -1.28
FXN-205ENST00000498653 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.08□□□□□ -1.28
FXN-205ENST00000498653 MTMR14Q8NCE2 650 aa7.08□□□□□ -1.28
FXN-205ENST00000498653 ATOH1Q92858 354 aaPredicted RBP7.08□□□□□ -1.28
FXN-205ENST00000498653 LHX6Q9UPM6 363 aa7.08□□□□□ -1.28
FXN-205ENST00000498653 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 NTSR2O95665 410 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 HMGCRP04035 888 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 ZEB1P37275 1124 aaPredicted RBP7.07□□□□□ -1.28
FXN-205ENST00000498653 FOSBP53539 338 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 RTP1P59025 263 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 NPM2Q86SE8 214 aaKnown RBP7.07□□□□□ -1.28
FXN-205ENST00000498653 ZBED3Q96IU2 234 aaPredicted RBP7.07□□□□□ -1.28
FXN-205ENST00000498653 HMX1Q9NP08 348 aaPredicted RBP7.07□□□□□ -1.28
FXN-205ENST00000498653 PDLIM7Q9NR12 457 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 TIMELESSQ9UNS1 1208 aa7.07□□□□□ -1.28
FXN-205ENST00000498653 TRIM43BA6NCK2 446 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 PPM1GO15355 546 aaPredicted RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 RNMTO43148 476 aaKnown RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 CETPP11597 493 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 SSTR3P32745 418 aaPredicted RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 VGLL4Q14135 290 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 NBPF12Q5TAG4 269 aaPredicted RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 ADSSL1Q8N142 457 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 HLA-CQ95604 372 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 ZDHHC16Q969W1 377 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 TRIM43Q96BQ3 446 aaPredicted RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 FSD1Q9BTV5 496 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 TEX13AQ9BXU3 409 aaPredicted RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 PCDHGA10Q9Y5H3 936 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 MTCH2Q9Y6C9 303 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 ARAP2Q8WZ64 1704 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 NBEAQ8NFP9 2946 aa7.06□□□□□ -1.28
FXN-205ENST00000498653 COL4A4P53420 1690 aaPredicted RBP7.06□□□□□ -1.28
FXN-205ENST00000498653 GAKO14976 1311 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 MAP3K7O43318 606 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 NBL1P41271 181 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 GRAPQ13588 217 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 PUM1Q14671 1186 aaKnown RBP eCLIP7.05□□□□□ -1.28
FXN-205ENST00000498653 MAP3K21Q5TCX8 1036 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 SUSD4Q5VX71 490 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 NBPF10Q6P3W6 841 aaKnown RBP7.05□□□□□ -1.28
FXN-205ENST00000498653 AEBP1Q8IUX7 1158 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 GRAPLQ8TC17 118 aaPredicted RBP7.05□□□□□ -1.28
FXN-205ENST00000498653 MARVELD3Q96A59 401 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 PRDM5Q9NQX1 630 aaPredicted RBP7.05□□□□□ -1.28
FXN-205ENST00000498653 PPP2R3BQ9Y5P8 575 aa7.05□□□□□ -1.28
FXN-205ENST00000498653 ZNF804BA4D1E1 1349 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 SPDYE5A6NIY4 337 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 IL9P15248 144 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 POU3F3P20264 500 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms