RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PLCL1Q15111 1095 aa7.94□□□□□ -1.14
SMC4-227ENST00000497984 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
SMC4-227ENST00000497984 KCNB2Q92953 911 aa7.94□□□□□ -1.14
SMC4-227ENST00000497984 NLRP2Q9NX02 1062 aa7.94□□□□□ -1.14
SMC4-227ENST00000497984 RNGTTO60942 597 aaKnown RBP7.93□□□□□ -1.14
SMC4-227ENST00000497984 DSC3Q14574 896 aa7.93□□□□□ -1.14
SMC4-227ENST00000497984 ZC3H12AQ5D1E8 599 aaKnown RBP7.93□□□□□ -1.14
SMC4-227ENST00000497984 ISL2Q96A47 359 aa7.93□□□□□ -1.14
SMC4-227ENST00000497984 DUSP23Q9BVJ7 150 aa7.93□□□□□ -1.14
SMC4-227ENST00000497984 PCOLCE2Q9UKZ9 415 aa7.93□□□□□ -1.14
SMC4-227ENST00000497984 CD8BP10966 210 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 FUT4P22083 530 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 ARNTP27540 789 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 HNRNPUQ00839 825 aaKnown RBP eCLIP7.92□□□□□ -1.142e-22■■■■■ 68.1
SMC4-227ENST00000497984 ZNF252P-AS1Q0IIN9 211 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 ARID3AQ99856 593 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 MKNK2Q9HBH9 465 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 PPP4R2Q9NY27 417 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 CACNA2D2Q9NY47 1150 aa7.92□□□□□ -1.14
SMC4-227ENST00000497984 C8AP07357 584 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 OXCT1P55809 520 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 ERVK-24P63145 666 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 NXPE4Q6UWF7 544 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 C3orf58Q8NDZ4 430 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 VAV3Q9UKW4 847 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 PLAGL2Q9UPG8 496 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
SMC4-227ENST00000497984 CARMIL2Q6F5E8 1435 aa7.91□□□□□ -1.14
SMC4-227ENST00000497984 NME2P22392 152 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 CD96P40200 585 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 JAG1P78504 1218 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 PRKCQQ04759 706 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMC4-227ENST00000497984 RNF214Q8ND24 703 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 GPBAR1Q8TDU6 330 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 ADAMTS6Q9UKP5 1117 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 GNEQ9Y223 722 aaKnown RBP7.9□□□□□ -1.14
SMC4-227ENST00000497984 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
SMC4-227ENST00000497984 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
SMC4-227ENST00000497984 TREHO43280 583 aa7.89□□□□□ -1.15
SMC4-227ENST00000497984 CEACAM5P06731 702 aa7.89□□□□□ -1.15
SMC4-227ENST00000497984 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
SMC4-227ENST00000497984 PDE4CQ08493 712 aa7.89□□□□□ -1.15
SMC4-227ENST00000497984 ENOX2Q16206 610 aaKnown RBP7.89□□□□□ -1.15
SMC4-227ENST00000497984 IFI16Q16666 785 aaKnown RBP7.89□□□□□ -1.15
SMC4-227ENST00000497984 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
SMC4-227ENST00000497984 MPRIPQ6WCQ1 1025 aa7.89□□□□□ -1.15
SMC4-227ENST00000497984 NECAB3Q96P71 396 aaPredicted RBP7.89□□□□□ -1.15
SMC4-227ENST00000497984 MBNL3Q9NUK0 354 aaKnown RBP7.89□□□□□ -1.15
SMC4-227ENST00000497984 NTF4P34130 210 aa7.88□□□□□ -1.15
SMC4-227ENST00000497984 FAM214BQ7L5A3 538 aa7.88□□□□□ -1.15
SMC4-227ENST00000497984 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMC4-227ENST00000497984 TOP6BLQ8N6T0 577 aa7.88□□□□□ -1.15
SMC4-227ENST00000497984 HEXIM2Q96MH2 286 aaKnown RBP7.88□□□□□ -1.15
SMC4-227ENST00000497984 EMILIN2Q9BXX0 1053 aa7.88□□□□□ -1.15
SMC4-227ENST00000497984 BIN1O00499 593 aa7.87□□□□□ -1.15
SMC4-227ENST00000497984 BMP6P22004 513 aa7.87□□□□□ -1.15
SMC4-227ENST00000497984 AOC3Q16853 763 aa7.87□□□□□ -1.15
SMC4-227ENST00000497984 ATG4DQ86TL0 474 aaPredicted RBP7.87□□□□□ -1.15
SMC4-227ENST00000497984 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
SMC4-227ENST00000497984 TNKS2Q9H2K2 1166 aa7.87□□□□□ -1.15
SMC4-227ENST00000497984 RC3H2Q9HBD1 1191 aaKnown RBP7.87□□□□□ -1.15
SMC4-227ENST00000497984 BIN2Q9UBW5 565 aaPredicted RBP7.87□□□□□ -1.15
SMC4-227ENST00000497984 ENC1O14682 589 aa7.86□□□□□ -1.15
SMC4-227ENST00000497984 PLCB3Q01970 1234 aa7.86□□□□□ -1.15
SMC4-227ENST00000497984 LCE4AQ5TA78 99 aa7.86□□□□□ -1.15
SMC4-227ENST00000497984 UBE3DQ7Z6J8 389 aa7.86□□□□□ -1.15
SMC4-227ENST00000497984 GRIN3AQ8TCU5 1115 aa7.86□□□□□ -1.15
SMC4-227ENST00000497984 HRASLS5Q96KN8 279 aa7.86□□□□□ -1.15
SMC4-227ENST00000497984 TMEM265A0A087WTH1 108 aa7.85□□□□□ -1.15
SMC4-227ENST00000497984 PAGE1O75459 146 aa7.85□□□□□ -1.15
SMC4-227ENST00000497984 RING1Q06587 406 aa7.85□□□□□ -1.15
SMC4-227ENST00000497984 PPM1JQ5JR12 505 aa7.85□□□□□ -1.15
SMC4-227ENST00000497984 LRRN4CLQ8ND94 238 aa7.85□□□□□ -1.15
SMC4-227ENST00000497984 CBX8Q9HC52 389 aa7.85□□□□□ -1.15
SMC4-227ENST00000497984 SSU72Q9NP77 194 aaKnown RBP7.85□□□□□ -1.15
SMC4-227ENST00000497984 MAPK1P28482 360 aa7.84□□□□□ -1.15
SMC4-227ENST00000497984 TPTE2Q6XPS3 522 aa7.84□□□□□ -1.15
SMC4-227ENST00000497984 ARHGAP27Q6ZUM4 889 aa7.84□□□□□ -1.15
SMC4-227ENST00000497984 PI4K2BQ8TCG2 481 aa7.84□□□□□ -1.15
SMC4-227ENST00000497984 ACSBG1Q96GR2 724 aa7.84□□□□□ -1.15
SMC4-227ENST00000497984 IGF2BP3O00425 579 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMC4-227ENST00000497984 TRIM37O94972 964 aa7.83□□□□□ -1.16
SMC4-227ENST00000497984 ITIH2P19823 946 aa7.83□□□□□ -1.16
SMC4-227ENST00000497984 ZNF648Q5T619 568 aaPredicted RBP7.83□□□□□ -1.16
SMC4-227ENST00000497984 RASIP1Q5U651 963 aa7.83□□□□□ -1.16
SMC4-227ENST00000497984 OSBPL7Q9BZF2 842 aa7.83□□□□□ -1.16
SMC4-227ENST00000497984 SNX11Q9Y5W9 270 aa7.83□□□□□ -1.16
SMC4-227ENST00000497984 CSADQ9Y600 493 aa7.83□□□□□ -1.16
SMC4-227ENST00000497984 DCDC2CA8MYV0 355 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 SUPT5HO00267 1087 aaKnown RBP7.82□□□□□ -1.16
SMC4-227ENST00000497984 GSTT1P30711 240 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 FBF1Q8TES7 1133 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 ANKRD24Q8TF21 1146 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 FAM168AQ92567 244 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 SETDB2Q96T68 719 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 SRCIN1Q9C0H9 1055 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 PRDM10Q9NQV6 1147 aa7.82□□□□□ -1.16
SMC4-227ENST00000497984 PPM1HQ9ULR3 514 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms