RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ATRNL1Q5VV63 1379 aa17.74■□□□□ 0.43
CXCL12-208ENST00000496375 LACTBP83111 547 aaPredicted RBP17.73■□□□□ 0.43
CXCL12-208ENST00000496375 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
CXCL12-208ENST00000496375 PICALMQ13492 652 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 KIF22Q14807 665 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 GORABQ5T7V8 394 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 SH3BP5LQ7L8J4 393 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 ANKRD23Q86SG2 305 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 HMG20BQ9P0W2 317 aa17.73■□□□□ 0.43
CXCL12-208ENST00000496375 MROH7-TTC4A0A0A0MT08 1334 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 PHF20L1A8MW92 1017 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 PDHXO00330 501 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 MECOMQ03112 1051 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 PDE3AQ14432 1141 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 SLC9C1Q4G0N8 1177 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 PI16Q6UXB8 463 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
CXCL12-208ENST00000496375 CPA4Q9UI42 421 aa17.72■□□□□ 0.43
CXCL12-208ENST00000496375 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
CXCL12-208ENST00000496375 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
CXCL12-208ENST00000496375 ECM2O94769 699 aaPredicted RBP17.71■□□□□ 0.43
CXCL12-208ENST00000496375 MOGSQ13724 837 aa17.71■□□□□ 0.43
CXCL12-208ENST00000496375 C17orf99Q6UX52 265 aa17.71■□□□□ 0.43
CXCL12-208ENST00000496375 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
CXCL12-208ENST00000496375 SCYL3Q8IZE3 742 aa17.71■□□□□ 0.43
CXCL12-208ENST00000496375 SPATA5Q8NB90 893 aa17.71■□□□□ 0.43
CXCL12-208ENST00000496375 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
CXCL12-208ENST00000496375 GPR75-ASB3A0A0A6YYF3 556 aa17.7■□□□□ 0.42
CXCL12-208ENST00000496375 CXCL11O14625 94 aa17.7■□□□□ 0.42
CXCL12-208ENST00000496375 SLURP2P0DP57 97 aa17.7■□□□□ 0.42
CXCL12-208ENST00000496375 EN2P19622 333 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-208ENST00000496375 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-208ENST00000496375 TBC1D9Q6ZT07 1266 aa17.7■□□□□ 0.42
CXCL12-208ENST00000496375 PICK1Q9NRD5 415 aa17.7■□□□□ 0.42
CXCL12-208ENST00000496375 PTPRAP18433 802 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 RHBDL3P58872 404 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 GSTO1P78417 241 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 MAP3K10Q02779 954 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 PANK1Q8TE04 598 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 NSUN4Q96CB9 384 aaKnown RBP17.69■□□□□ 0.42
CXCL12-208ENST00000496375 TMEM106CQ9BVX2 250 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 RAI14Q9P0K7 980 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 ADGRA2Q96PE1 1338 aa17.69■□□□□ 0.42
CXCL12-208ENST00000496375 GNRH1P01148 92 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 LDHCP07864 332 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 CTGFP29279 349 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 MCAMP43121 646 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 DOCK1Q14185 1865 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 GPAT2Q6NUI2 795 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 ITPRIPQ8IWB1 547 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
CXCL12-208ENST00000496375 PARK7Q99497 189 aaKnown RBP17.68■□□□□ 0.42
CXCL12-208ENST00000496375 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-208ENST00000496375 MYCP01106 439 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-208ENST00000496375 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 PSMC4P43686 418 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 PRMT2P55345 433 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 POLA2Q14181 598 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-208ENST00000496375 DDX19BQ9UMR2 479 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 AFG3L2Q9Y4W6 797 aa17.67■□□□□ 0.42
CXCL12-208ENST00000496375 PHIPQ8WWQ0 1821 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 CTNND1O60716 968 aaKnown RBP17.66■□□□□ 0.42
CXCL12-208ENST00000496375 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
CXCL12-208ENST00000496375 FMNL1O95466 1100 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-208ENST00000496375 CYP2C8P10632 490 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
CXCL12-208ENST00000496375 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-208ENST00000496375 GADL1Q6ZQY3 521 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 FASTKD5Q7L8L6 764 aaKnown RBP17.66■□□□□ 0.42
CXCL12-208ENST00000496375 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 PTPRFP10586 1907 aa17.66■□□□□ 0.42
CXCL12-208ENST00000496375 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-208ENST00000496375 OSBPP22059 807 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 TNNI3KQ59H18 835 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.65■□□□□ 0.42
CXCL12-208ENST00000496375 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-208ENST00000496375 SRRDQ9UH36 339 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 FPGT-TNNI3KV9GXZ4 949 aa17.65■□□□□ 0.42
CXCL12-208ENST00000496375 FAM196BA6NMK8 535 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 TBC1D12O60347 775 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
CXCL12-208ENST00000496375 BCRP11274 1271 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 HOXD10P28358 340 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 CCDC84Q86UT8 332 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-208ENST00000496375 TEX11Q8IYF3 940 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 DBNDD2Q9BQY9 259 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-208ENST00000496375 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms