RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
RFTN1-211ENST00000495666 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 DDTLA6NHG4 134 aaPredicted RBP13.18□□□□□ -0.3
RFTN1-211ENST00000495666 MCAMP43121 646 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 PPIL2Q13356 520 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 MTX1Q13505 466 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 PICK1Q9NRD5 415 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 PTCH2Q9Y6C5 1203 aa13.18□□□□□ -0.3
RFTN1-211ENST00000495666 HTTP42858 3142 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 PDHXO00330 501 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
RFTN1-211ENST00000495666 SH3TC2Q8TF17 1288 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
RFTN1-211ENST00000495666 CCDC8Q9H0W5 538 aaPredicted RBP13.17□□□□□ -0.3
RFTN1-211ENST00000495666 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
RFTN1-211ENST00000495666 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 NDUFB9Q9Y6M9 179 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 ZHX2Q9Y6X8 837 aa13.17□□□□□ -0.3
RFTN1-211ENST00000495666 GAKO14976 1311 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 CYP2C8P10632 490 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 KIF22Q14807 665 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 SLC9C1Q4G0N8 1177 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
RFTN1-211ENST00000495666 ZNF384Q8TF68 577 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
RFTN1-211ENST00000495666 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 CDK5RAP2Q96SN8 1893 aa13.16□□□□□ -0.3
RFTN1-211ENST00000495666 GSTO1P78417 241 aa13.15□□□□□ -0.3
RFTN1-211ENST00000495666 PPATQ06203 517 aa13.15□□□□□ -0.3
RFTN1-211ENST00000495666 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
RFTN1-211ENST00000495666 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
RFTN1-211ENST00000495666 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
RFTN1-211ENST00000495666 PTPRFP10586 1907 aa13.15□□□□□ -0.3
RFTN1-211ENST00000495666 PHIPQ8WWQ0 1821 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 TLR2O60603 784 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 ENTPD3O75355 529 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
RFTN1-211ENST00000495666 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
RFTN1-211ENST00000495666 ZAP70P43403 619 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
RFTN1-211ENST00000495666 MAPKAPK5Q8IW41 473 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
RFTN1-211ENST00000495666 SAP30BPQ9UHR5 308 aaKnown RBP13.14□□□□□ -0.31
RFTN1-211ENST00000495666 KIAA0100Q14667 2235 aaKnown RBP13.14□□□□□ -0.31
RFTN1-211ENST00000495666 RFX7Q2KHR2 1363 aa13.14□□□□□ -0.31
RFTN1-211ENST00000495666 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 MGAMO43451 1857 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
RFTN1-211ENST00000495666 LDHCP07864 332 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
RFTN1-211ENST00000495666 RHBDL3P58872 404 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
RFTN1-211ENST00000495666 POLA2Q14181 598 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 MIGA1Q8NAN2 632 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 IL1RAPL2Q9NP60 686 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 ZNF112Q9UJU3 913 aa13.13□□□□□ -0.31
RFTN1-211ENST00000495666 ATRNL1Q5VV63 1379 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 CYP2E1P05181 493 aaPredicted RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 PTPRAP18433 802 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 PSMC4P43686 418 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 CEP85Q6P2H3 762 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 ANKRD23Q86SG2 305 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 AACSQ86V21 672 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 DBNLQ9UJU6 430 aaKnown RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
RFTN1-211ENST00000495666 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
RFTN1-211ENST00000495666 MYH1P12882 1939 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-211ENST00000495666 GDF11O95390 407 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 CTGFP29279 349 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-211ENST00000495666 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
RFTN1-211ENST00000495666 ADGRA1Q86SQ6 560 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms