RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 SULF2Q8IWU5 870 aa8.38□□□□□ -1.07
SRRM1-219ENST00000495561 RETREG2Q8NC44 543 aa8.38□□□□□ -1.07
SRRM1-219ENST00000495561 CCER1Q8TC90 406 aaPredicted RBP8.38□□□□□ -1.07
SRRM1-219ENST00000495561 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
SRRM1-219ENST00000495561 VAV3Q9UKW4 847 aa8.38□□□□□ -1.07
SRRM1-219ENST00000495561 SOWAHDA6NJG2 315 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 BIN1O00499 593 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
SRRM1-219ENST00000495561 CD96P40200 585 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 PRKCQQ04759 706 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 ZC3H12AQ5D1E8 599 aaKnown RBP8.37□□□□□ -1.07
SRRM1-219ENST00000495561 TMC7Q7Z402 723 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 ISL2Q96A47 359 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 ADAMTS6Q9UKP5 1117 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
SRRM1-219ENST00000495561 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
SRRM1-219ENST00000495561 ARNTP27540 789 aa8.36□□□□□ -1.07
SRRM1-219ENST00000495561 OXCT1P55809 520 aa8.36□□□□□ -1.07
SRRM1-219ENST00000495561 IFI16Q16666 785 aaKnown RBP8.36□□□□□ -1.07
SRRM1-219ENST00000495561 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
SRRM1-219ENST00000495561 CEACAM5P06731 702 aa8.35□□□□□ -1.07
SRRM1-219ENST00000495561 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
SRRM1-219ENST00000495561 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
SRRM1-219ENST00000495561 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
SRRM1-219ENST00000495561 TOP6BLQ8N6T0 577 aa8.35□□□□□ -1.07
SRRM1-219ENST00000495561 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
SRRM1-219ENST00000495561 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
SRRM1-219ENST00000495561 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
SRRM1-219ENST00000495561 NME2P22392 152 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 ERVK-24P63145 666 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 AOC3Q16853 763 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-219ENST00000495561 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
SRRM1-219ENST00000495561 RNF214Q8ND24 703 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 GPBAR1Q8TDU6 330 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 HRASLS5Q96KN8 279 aa8.34□□□□□ -1.07
SRRM1-219ENST00000495561 SSU72Q9NP77 194 aaKnown RBP8.34□□□□□ -1.07
SRRM1-219ENST00000495561 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
SRRM1-219ENST00000495561 DSC3Q14574 896 aa8.33□□□□□ -1.08
SRRM1-219ENST00000495561 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.33□□□□□ -1.08
SRRM1-219ENST00000495561 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-219ENST00000495561 PI4K2BQ8TCG2 481 aa8.33□□□□□ -1.08
SRRM1-219ENST00000495561 ARID3AQ99856 593 aa8.33□□□□□ -1.08
SRRM1-219ENST00000495561 EMILIN2Q9BXX0 1053 aa8.33□□□□□ -1.08
SRRM1-219ENST00000495561 DCTN4Q9UJW0 460 aa8.33□□□□□ -1.08
SRRM1-219ENST00000495561 TMEM265A0A087WTH1 108 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 PNMA6FA0A0J9YX94 578 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 ITIH2P19823 946 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 MPRIPQ6WCQ1 1025 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 LRRN4CLQ8ND94 238 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 C3orf58Q8NDZ4 430 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 HEXIM2Q96MH2 286 aaKnown RBP8.32□□□□□ -1.08
SRRM1-219ENST00000495561 CACNA2D2Q9NY47 1150 aa8.32□□□□□ -1.08
SRRM1-219ENST00000495561 ENOX2Q16206 610 aaKnown RBP8.31□□□□□ -1.08
SRRM1-219ENST00000495561 LCE1DQ5T752 114 aa8.31□□□□□ -1.08
SRRM1-219ENST00000495561 FAM214BQ7L5A3 538 aa8.31□□□□□ -1.08
SRRM1-219ENST00000495561 FAM168AQ92567 244 aa8.31□□□□□ -1.08
SRRM1-219ENST00000495561 ACSBG1Q96GR2 724 aa8.31□□□□□ -1.08
SRRM1-219ENST00000495561 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-219ENST00000495561 TNKS2Q9H2K2 1166 aa8.31□□□□□ -1.08
SRRM1-219ENST00000495561 CBX8Q9HC52 389 aa8.31□□□□□ -1.08
SRRM1-219ENST00000495561 BIN2Q9UBW5 565 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-219ENST00000495561 PDE4CQ08493 712 aa8.3□□□□□ -1.08
SRRM1-219ENST00000495561 TREHO43280 583 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 NTF4P34130 210 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 ANGEL2Q5VTE6 544 aaKnown RBP8.29□□□□□ -1.08
SRRM1-219ENST00000495561 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 GRIN3AQ8TCU5 1115 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 CSADQ9Y600 493 aa8.29□□□□□ -1.08
SRRM1-219ENST00000495561 BMP6P22004 513 aa8.28□□□□□ -1.08
SRRM1-219ENST00000495561 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
SRRM1-219ENST00000495561 GNEQ9Y223 722 aaKnown RBP8.28□□□□□ -1.08
SRRM1-219ENST00000495561 SNX11Q9Y5W9 270 aa8.28□□□□□ -1.08
SRRM1-219ENST00000495561 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 ENC1O14682 589 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 PAGE1O75459 146 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 MAPK1P28482 360 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 ZNF124Q15973 351 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 SLC23A3Q6PIS1 610 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 PRDM10Q9NQV6 1147 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 GTF2IRD1Q9UHL9 959 aa8.27□□□□□ -1.09
SRRM1-219ENST00000495561 IGF2BP3O00425 579 aaKnown RBP eCLIP8.26□□□□□ -1.09
SRRM1-219ENST00000495561 TRIM37O94972 964 aa8.26□□□□□ -1.09
SRRM1-219ENST00000495561 GSTT1P30711 240 aa8.26□□□□□ -1.09
SRRM1-219ENST00000495561 RING1Q06587 406 aa8.26□□□□□ -1.09
SRRM1-219ENST00000495561 SPACA3Q8IXA5 215 aa8.26□□□□□ -1.09
SRRM1-219ENST00000495561 TMEM40Q8WWA1 233 aa8.26□□□□□ -1.09
SRRM1-219ENST00000495561 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
SRRM1-219ENST00000495561 FBXO24O75426 580 aa8.25□□□□□ -1.09
SRRM1-219ENST00000495561 FARP2O94887 1054 aaPredicted RBP8.25□□□□□ -1.09
SRRM1-219ENST00000495561 ZBTB37Q5TC79 503 aa8.25□□□□□ -1.09
SRRM1-219ENST00000495561 C12orf40Q86WS4 652 aa8.25□□□□□ -1.09
SRRM1-219ENST00000495561 CEP44Q9C0F1 390 aa8.25□□□□□ -1.09
SRRM1-219ENST00000495561 PICK1Q9NRD5 415 aa8.25□□□□□ -1.09
SRRM1-219ENST00000495561 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
SRRM1-219ENST00000495561 SAMM50Q9Y512 469 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms