RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SPATA5Q8NB90 893 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 TEKT1Q969V4 418 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 HHIPL1Q96JK4 782 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 TDRD3Q9H7E2 651 aaKnown RBP10.76□□□□□ -0.69
ITGB1-217ENST00000494395 IL1RAPL2Q9NP60 686 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 ZNF70Q9UC06 446 aaPredicted RBP10.76□□□□□ -0.69
ITGB1-217ENST00000494395 DAGLAQ9Y4D2 1042 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 GAKO14976 1311 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 RBM5P52756 815 aaKnown RBP eCLIP10.75□□□□□ -0.69
ITGB1-217ENST00000494395 PDE4DQ08499 809 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 GORABQ5T7V8 394 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 PRAMEF18Q5VWM3 479 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 AACSQ86V21 672 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 FAM163AQ96GL9 167 aaPredicted RBP10.75□□□□□ -0.69
ITGB1-217ENST00000494395 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 ZNF408Q9H9D4 720 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 GBA2Q9HCG7 927 aaPredicted RBP10.75□□□□□ -0.69
ITGB1-217ENST00000494395 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
ITGB1-217ENST00000494395 PCDHGA10Q9Y5H3 936 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 PPP2R3BQ9Y5P8 575 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 OTOFQ9HC10 1997 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 RFX7Q2KHR2 1363 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 LAMB1P07942 1786 aa10.75□□□□□ -0.69
ITGB1-217ENST00000494395 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 IRF6O14896 467 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 MYO1BO43795 1136 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 CYP2E1P05181 493 aaPredicted RBP10.74□□□□□ -0.69
ITGB1-217ENST00000494395 ZAP70P43403 619 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 VEGFBP49765 207 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 DEFB115Q30KQ5 88 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 CCDC158Q5M9N0 1113 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 CLASRPQ8N2M8 674 aaKnown RBP10.74□□□□□ -0.69
ITGB1-217ENST00000494395 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 CCDC102AQ96A19 550 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 TEPSINQ96N21 525 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 DEFB129Q9H1M3 183 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 ABT1Q9ULW3 272 aaKnown RBP10.74□□□□□ -0.69
ITGB1-217ENST00000494395 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
ITGB1-217ENST00000494395 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
ITGB1-217ENST00000494395 APBB1O00213 710 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 MAP3K7O43318 606 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 FKBP1BP68106 108 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 MECOMQ03112 1051 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 AAMPQ13685 434 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 FKBP1CQ5VVH2 108 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 SPTY2D1Q68D10 685 aaPredicted RBP10.73□□□□□ -0.69
ITGB1-217ENST00000494395 TBC1D9Q6ZT07 1266 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
ITGB1-217ENST00000494395 LRRCC1Q9C099 1032 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 CDHR5Q9HBB8 845 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 ABCF2Q9UG63 623 aa10.73□□□□□ -0.69
ITGB1-217ENST00000494395 RPAP1Q9BWH6 1393 aaPredicted RBP10.73□□□□□ -0.69
ITGB1-217ENST00000494395 SMARCA5O60264 1052 aaPredicted RBP10.72□□□□□ -0.69
ITGB1-217ENST00000494395 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
ITGB1-217ENST00000494395 CACNB3P54284 484 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 TNFAIP1Q13829 316 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 RASA3Q14644 834 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 CDC42EP5Q6NZY7 148 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 MOB2Q70IA6 237 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 ERICH6Q7L0X2 663 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 FAM83AQ86UY5 434 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 C2orf69Q8N8R5 385 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 EXOC6Q8TAG9 804 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.72□□□□□ -0.69
ITGB1-217ENST00000494395 VEZTQ9HBM0 779 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 SCUBE2Q9NQ36 999 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 PIH1D3Q9NQM4 214 aaKnown RBP10.72□□□□□ -0.69
ITGB1-217ENST00000494395 MROH7-TTC4A0A0A0MT08 1334 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 MYH7P12883 1935 aa10.72□□□□□ -0.69
ITGB1-217ENST00000494395 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 FAM155AB1AL88 458 aaPredicted RBP10.71□□□□□ -0.69
ITGB1-217ENST00000494395 TCP10L2B9ZVM9 353 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 IGSF3O75054 1194 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 PCNTO95613 3336 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 HUNKP57058 714 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 RHBDL3P58872 404 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 HDAC1Q13547 482 aaPredicted RBP10.71□□□□□ -0.69
ITGB1-217ENST00000494395 NBPF12Q5TAG4 269 aaPredicted RBP10.71□□□□□ -0.69
ITGB1-217ENST00000494395 CYP4F22Q6NT55 531 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
ITGB1-217ENST00000494395 CAPNS2Q96L46 248 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.69
ITGB1-217ENST00000494395 TMEM39BQ9GZU3 492 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 ANTXR1Q9H6X2 564 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 NDUFB9Q9Y6M9 179 aa10.71□□□□□ -0.69
ITGB1-217ENST00000494395 IFIT2P09913 472 aaKnown RBP10.7□□□□□ -0.7
ITGB1-217ENST00000494395 BTDP43251 543 aa10.7□□□□□ -0.7
ITGB1-217ENST00000494395 NFIAQ12857 509 aa10.7□□□□□ -0.7
ITGB1-217ENST00000494395 LDLRAD1Q5T700 205 aa10.7□□□□□ -0.7
ITGB1-217ENST00000494395 SLF2Q8IX21 1173 aa10.7□□□□□ -0.7
ITGB1-217ENST00000494395 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.72e-7■■■□□ 15.5
ITGB1-217ENST00000494395 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms