RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 MIGA2Q7L4E1 593 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 SH3BP5LQ7L8J4 393 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 MAGEB6Q8N7X4 407 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 EDC3Q96F86 508 aaKnown RBP19.66■□□□□ 0.74
SATB1-217ENST00000493952 WNK4Q96J92 1243 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 CSRNP1Q96S65 589 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 NOL10Q9BSC4 688 aaKnown RBP19.66■□□□□ 0.74
SATB1-217ENST00000493952 BOLA2Q9H3K6 86 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 ATRNL1Q5VV63 1379 aa19.66■□□□□ 0.74
SATB1-217ENST00000493952 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
SATB1-217ENST00000493952 MYH8P13535 1937 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 BAZ2AQ9UIF9 1905 aaKnown RBP19.65■□□□□ 0.74
SATB1-217ENST00000493952 DDTLA6NHG4 134 aaPredicted RBP19.65■□□□□ 0.74
SATB1-217ENST00000493952 BAG3O95817 575 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 HSPA8P11142 646 aaKnown RBP19.65■□□□□ 0.74
SATB1-217ENST00000493952 CTCFP49711 727 aaPredicted RBP19.65■□□□□ 0.74
SATB1-217ENST00000493952 PPP4CP60510 307 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 MAP3K9P80192 1104 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 MAP3K12Q12852 859 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
SATB1-217ENST00000493952 VGLL4Q14135 290 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 TEX11Q8IYF3 940 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 ZNF341Q9BYN7 854 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 ELP3Q9H9T3 547 aa19.65■□□□□ 0.74
SATB1-217ENST00000493952 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
SATB1-217ENST00000493952 DYNLL1P63167 89 aaKnown RBP19.64■□□□□ 0.73
SATB1-217ENST00000493952 ZSCAN29Q8IWY8 852 aaPredicted RBP19.64■□□□□ 0.73
SATB1-217ENST00000493952 WRNIP1Q96S55 665 aa19.64■□□□□ 0.73
SATB1-217ENST00000493952 HAUS7Q99871 368 aa19.64■□□□□ 0.73
SATB1-217ENST00000493952 PAG1Q9NWQ8 432 aa19.64■□□□□ 0.73
SATB1-217ENST00000493952 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
SATB1-217ENST00000493952 ZBTB48P10074 688 aaPredicted RBP19.63■□□□□ 0.73
SATB1-217ENST00000493952 GJA5P36382 358 aa19.63■□□□□ 0.73
SATB1-217ENST00000493952 REM2Q8IYK8 340 aaPredicted RBP19.63■□□□□ 0.73
SATB1-217ENST00000493952 ECHDC1Q9NTX5 307 aa19.63■□□□□ 0.73
SATB1-217ENST00000493952 CSADQ9Y600 493 aa19.63■□□□□ 0.73
SATB1-217ENST00000493952 CA12O43570 354 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 PDE6AP16499 860 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 PLCG2P16885 1265 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 LBX1P52954 281 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 TSHZ3Q63HK5 1081 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 ZKSCAN4Q969J2 545 aaPredicted RBP19.62■□□□□ 0.73
SATB1-217ENST00000493952 OPTNQ96CV9 577 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 OSBPL5Q9H0X9 879 aaPredicted RBP19.62■□□□□ 0.73
SATB1-217ENST00000493952 SNCAIPQ9Y6H5 919 aa19.62■□□□□ 0.73
SATB1-217ENST00000493952 SLURP2P0DP57 97 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 INPP5BP32019 993 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 SLC9C2Q5TAH2 1124 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 TMED8Q6PL24 325 aaPredicted RBP19.61■□□□□ 0.73
SATB1-217ENST00000493952 OTUD7AQ8TE49 926 aaPredicted RBP19.61■□□□□ 0.73
SATB1-217ENST00000493952 TGFBRAP1Q8WUH2 860 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 RNF186Q9NXI6 227 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 ZNF112Q9UJU3 913 aa19.61■□□□□ 0.73
SATB1-217ENST00000493952 FLT1P17948 1338 aa19.6■□□□□ 0.73
SATB1-217ENST00000493952 TM4SF4P48230 202 aa19.6■□□□□ 0.73
SATB1-217ENST00000493952 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
SATB1-217ENST00000493952 COL13A1Q5TAT6 717 aaPredicted RBP19.6■□□□□ 0.73
SATB1-217ENST00000493952 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
SATB1-217ENST00000493952 GPATCH3Q96I76 525 aa19.6■□□□□ 0.73
SATB1-217ENST00000493952 ZNF532Q9HCE3 1301 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 TCRBV5S4A2TA0A5A2 114 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 TRPA1O75762 1119 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 MAP3K10Q02779 954 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 SREBF2Q12772 1141 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 ANKRD45Q5TZF3 282 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
SATB1-217ENST00000493952 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 SAGE1Q9NXZ1 904 aa19.59■□□□□ 0.73
SATB1-217ENST00000493952 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.72
SATB1-217ENST00000493952 OTUD5Q96G74 571 aa19.58■□□□□ 0.72
SATB1-217ENST00000493952 TTC41PQ6P2S7 1318 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 SALL3Q9BXA9 1300 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 PHF20L1A8MW92 1017 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 CHGBP05060 677 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 ADD2P35612 726 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 CERS3Q8IU89 383 aa19.57■□□□□ 0.72
SATB1-217ENST00000493952 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
SATB1-217ENST00000493952 MAGEB6P1A0A0J9YX57 407 aa19.56■□□□□ 0.72
SATB1-217ENST00000493952 TBC1D12O60347 775 aa19.56■□□□□ 0.72
SATB1-217ENST00000493952 IGHDP01880 384 aa19.56■□□□□ 0.72
SATB1-217ENST00000493952 NOL9Q5SY16 702 aaKnown RBP19.56■□□□□ 0.72
SATB1-217ENST00000493952 SMC5Q8IY18 1101 aa19.56■□□□□ 0.72
SATB1-217ENST00000493952 PI4K2BQ8TCG2 481 aa19.56■□□□□ 0.72
SATB1-217ENST00000493952 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.72
SATB1-217ENST00000493952 IGF2BP3O00425 579 aaKnown RBP eCLIP19.55■□□□□ 0.72
SATB1-217ENST00000493952 MX1P20591 662 aa19.55■□□□□ 0.72
SATB1-217ENST00000493952 INHBEP58166 350 aa19.55■□□□□ 0.72
SATB1-217ENST00000493952 MS4A4AQ96JQ5 239 aa19.55■□□□□ 0.72
SATB1-217ENST00000493952 DHX36Q9H2U1 1008 aaKnown RBP19.55■□□□□ 0.72
SATB1-217ENST00000493952 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
SATB1-217ENST00000493952 SAP30BPQ9UHR5 308 aaKnown RBP19.55■□□□□ 0.72
SATB1-217ENST00000493952 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
SATB1-217ENST00000493952 USP5P45974 858 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms