RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
PDCD11-206ENST00000493610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDCD11-206ENST00000493610 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
PDCD11-206ENST00000493610 EDC3Q96F86 508 aaKnown RBP16.7■□□□□ 0.26
PDCD11-206ENST00000493610 PTPN18Q99952 460 aa16.7■□□□□ 0.26
PDCD11-206ENST00000493610 COL2A1P02458 1487 aaPredicted RBP16.69■□□□□ 0.26
PDCD11-206ENST00000493610 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
PDCD11-206ENST00000493610 IGF2BP3O00425 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDCD11-206ENST00000493610 LDHCP07864 332 aa16.69■□□□□ 0.26
PDCD11-206ENST00000493610 GSTO1P78417 241 aa16.69■□□□□ 0.26
PDCD11-206ENST00000493610 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
PDCD11-206ENST00000493610 OPTNQ96CV9 577 aa16.69■□□□□ 0.26
PDCD11-206ENST00000493610 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.69■□□□□ 0.26
PDCD11-206ENST00000493610 SPDYE5A6NIY4 337 aa16.68■□□□□ 0.26
PDCD11-206ENST00000493610 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
PDCD11-206ENST00000493610 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
PDCD11-206ENST00000493610 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
PDCD11-206ENST00000493610 BEGAINQ9BUH8 593 aa16.68■□□□□ 0.26
PDCD11-206ENST00000493610 LRRCC1Q9C099 1032 aa16.68■□□□□ 0.26
PDCD11-206ENST00000493610 AATFQ9NY61 560 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDCD11-206ENST00000493610 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
PDCD11-206ENST00000493610 IGSF3O75054 1194 aa16.67■□□□□ 0.26
PDCD11-206ENST00000493610 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
PDCD11-206ENST00000493610 CHGBP05060 677 aa16.67■□□□□ 0.26
PDCD11-206ENST00000493610 ATP5JP18859 108 aa16.67■□□□□ 0.26
PDCD11-206ENST00000493610 PICALMQ13492 652 aa16.67■□□□□ 0.26
PDCD11-206ENST00000493610 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
PDCD11-206ENST00000493610 CFHR5Q9BXR6 569 aa16.67■□□□□ 0.26
PDCD11-206ENST00000493610 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
PDCD11-206ENST00000493610 DDX60LQ5H9U9 1706 aaKnown RBP16.67■□□□□ 0.26
PDCD11-206ENST00000493610 TCRBV5S4A2TA0A5A2 114 aa16.66■□□□□ 0.26
PDCD11-206ENST00000493610 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
PDCD11-206ENST00000493610 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
PDCD11-206ENST00000493610 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
PDCD11-206ENST00000493610 CYP7A1P22680 504 aa16.66■□□□□ 0.26
PDCD11-206ENST00000493610 SLFNL1Q499Z3 407 aa16.66■□□□□ 0.26
PDCD11-206ENST00000493610 NOL9Q5SY16 702 aaKnown RBP16.66■□□□□ 0.26
PDCD11-206ENST00000493610 IFNL1Q8IU54 200 aa16.66■□□□□ 0.26
PDCD11-206ENST00000493610 MAGEB6Q8N7X4 407 aa16.66■□□□□ 0.26
PDCD11-206ENST00000493610 OSBPL5Q9H0X9 879 aaPredicted RBP16.66■□□□□ 0.26
PDCD11-206ENST00000493610 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 DCAF15Q66K64 600 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 TNS4Q8IZW8 715 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 HAUS7Q99871 368 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 RIOK1Q9BRS2 568 aaKnown RBP16.65■□□□□ 0.26
PDCD11-206ENST00000493610 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
PDCD11-206ENST00000493610 FAM196BA6NMK8 535 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 GOLIM4O00461 696 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 MOGSQ13724 837 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 ERO1BQ86YB8 467 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 MIGA1Q8NAN2 632 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 OTUD7AQ8TE49 926 aaPredicted RBP16.64■□□□□ 0.25
PDCD11-206ENST00000493610 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.64■□□□□ 0.25
PDCD11-206ENST00000493610 FLT1P17948 1338 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
PDCD11-206ENST00000493610 PTPRFP10586 1907 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 MYH7P12883 1935 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 IRF6O14896 467 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 TBC1D12O60347 775 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 PDE6AP16499 860 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
PDCD11-206ENST00000493610 CSADQ9Y600 493 aa16.63■□□□□ 0.25
PDCD11-206ENST00000493610 MYH1P12882 1939 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 ATAD5Q96QE3 1844 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 INHBEP58166 350 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 JAG1P78504 1218 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 CAP1Q01518 475 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 PPIL2Q13356 520 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
PDCD11-206ENST00000493610 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
PDCD11-206ENST00000493610 BAG3O95817 575 aa16.61■□□□□ 0.25
PDCD11-206ENST00000493610 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
PDCD11-206ENST00000493610 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
PDCD11-206ENST00000493610 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
PDCD11-206ENST00000493610 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
PDCD11-206ENST00000493610 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
PDCD11-206ENST00000493610 KCNH4Q9UQ05 1017 aa16.61■□□□□ 0.25
PDCD11-206ENST00000493610 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
PDCD11-206ENST00000493610 ZNF532Q9HCE3 1301 aa16.61■□□□□ 0.25
PDCD11-206ENST00000493610 GPR25O00155 361 aa16.6■□□□□ 0.25
PDCD11-206ENST00000493610 PLCG2P16885 1265 aa16.6■□□□□ 0.25
PDCD11-206ENST00000493610 ADD2P35612 726 aa16.6■□□□□ 0.25
PDCD11-206ENST00000493610 EVX2Q03828 476 aa16.6■□□□□ 0.25
PDCD11-206ENST00000493610 PPATQ06203 517 aa16.6■□□□□ 0.25
PDCD11-206ENST00000493610 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
PDCD11-206ENST00000493610 SHROOM1Q2M3G4 852 aaPredicted RBP16.6■□□□□ 0.25
PDCD11-206ENST00000493610 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms