RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 PHF20L1A8MW92 1017 aa27.3■■□□□ 1.96
LYSMD4-208ENST00000493256 MCAMP43121 646 aa27.3■■□□□ 1.96
LYSMD4-208ENST00000493256 ATP8B2P98198 1209 aa27.3■■□□□ 1.96
LYSMD4-208ENST00000493256 PICALMQ13492 652 aa27.3■■□□□ 1.96
LYSMD4-208ENST00000493256 ZSCAN29Q8IWY8 852 aaPredicted RBP27.3■■□□□ 1.96
LYSMD4-208ENST00000493256 CENPFP49454 3210 aa27.29■■□□□ 1.96
LYSMD4-208ENST00000493256 DDTLA6NHG4 134 aaPredicted RBP27.29■■□□□ 1.96
LYSMD4-208ENST00000493256 RHBDL3P58872 404 aa27.29■■□□□ 1.96
LYSMD4-208ENST00000493256 ITPRIPQ8IWB1 547 aa27.29■■□□□ 1.96
LYSMD4-208ENST00000493256 NSUN4Q96CB9 384 aaKnown RBP27.29■■□□□ 1.96
LYSMD4-208ENST00000493256 GPR108Q9NPR9 543 aa27.28■■□□□ 1.96
LYSMD4-208ENST00000493256 ZSWIM8A7E2V4 1837 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 KIAA0100Q14667 2235 aaKnown RBP27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 ZBED9Q6R2W3 1325 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 UQCRFS1P1P0C7P4 283 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 SLURP2P0DP57 97 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 GSTO1P78417 241 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 MAP3K10Q02779 954 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 OS9Q13438 667 aaPredicted RBP27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 MOGSQ13724 837 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 ARHGEF6Q15052 776 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 TNNI3KQ59H18 835 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 ANKRD23Q86SG2 305 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 RAI14Q9P0K7 980 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 FPGT-TNNI3KV9GXZ4 949 aa27.27■■□□□ 1.96
LYSMD4-208ENST00000493256 ZBTB7BO15156 539 aaPredicted RBP27.26■■□□□ 1.95
LYSMD4-208ENST00000493256 SCYL3Q8IZE3 742 aa27.26■■□□□ 1.95
LYSMD4-208ENST00000493256 ARMC5Q96C12 935 aa27.26■■□□□ 1.95
LYSMD4-208ENST00000493256 PDHXO00330 501 aa27.25■■□□□ 1.95
LYSMD4-208ENST00000493256 SURF6O75683 361 aaKnown RBP27.25■■□□□ 1.95
LYSMD4-208ENST00000493256 LDHCP07864 332 aa27.25■■□□□ 1.95
LYSMD4-208ENST00000493256 DBNDD2Q9BQY9 259 aa27.25■■□□□ 1.95
LYSMD4-208ENST00000493256 ARHGAP39Q9C0H5 1083 aa27.25■■□□□ 1.95
LYSMD4-208ENST00000493256 POTEFA5A3E0 1075 aa27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 CXCL11O14625 94 aa27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 LACTBP83111 547 aaPredicted RBP27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 PICK1Q9NRD5 415 aa27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 SNRKQ9NRH2 765 aa27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 LRP2BPQ9P2M1 347 aa27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 PTCH2Q9Y6C5 1203 aa27.24■■□□□ 1.95
LYSMD4-208ENST00000493256 NPM3O75607 178 aaKnown RBP27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 PTPRAP18433 802 aa27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 TTC39AQ5SRH9 613 aa27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 C17orf99Q6UX52 265 aa27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 CPA4Q9UI42 421 aa27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 NOP58Q9Y2X3 529 aaKnown RBP27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 ZHX2Q9Y6X8 837 aa27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 DOCK1Q14185 1865 aa27.23■■□□□ 1.95
LYSMD4-208ENST00000493256 RBBP6Q7Z6E9 1792 aaKnown RBP27.22■■□□□ 1.95
LYSMD4-208ENST00000493256 ADGRA2Q96PE1 1338 aa27.22■■□□□ 1.95
LYSMD4-208ENST00000493256 MAP4K4O95819 1239 aaPredicted RBP27.22■■□□□ 1.95
LYSMD4-208ENST00000493256 KIF22Q14807 665 aa27.22■■□□□ 1.95
LYSMD4-208ENST00000493256 CCDC158Q5M9N0 1113 aa27.21■■□□□ 1.95
LYSMD4-208ENST00000493256 GPAT2Q6NUI2 795 aa27.21■■□□□ 1.95
LYSMD4-208ENST00000493256 MAST2Q6P0Q8 1798 aa27.2■■□□□ 1.95
LYSMD4-208ENST00000493256 CTNND1O60716 968 aaKnown RBP27.2■■□□□ 1.94
LYSMD4-208ENST00000493256 AFG3L2Q9Y4W6 797 aa27.2■■□□□ 1.94
LYSMD4-208ENST00000493256 PHIPQ8WWQ0 1821 aa27.2■■□□□ 1.94
LYSMD4-208ENST00000493256 COL2A1P02458 1487 aaPredicted RBP27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 A0A0G2JLL6 359 aaPredicted RBP27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 FAM196BA6NMK8 535 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 TBC1D12O60347 775 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 SLC9C1Q4G0N8 1177 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 PRRT2Q7Z6L0 340 aaPredicted RBP27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 TEX11Q8IYF3 940 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 PANK1Q8TE04 598 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 ZNF333Q96JL9 665 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 OSBPL5Q9H0X9 879 aaPredicted RBP27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 PTPRFP10586 1907 aa27.19■■□□□ 1.94
LYSMD4-208ENST00000493256 ECM2O94769 699 aaPredicted RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 CYP2E1P05181 493 aaPredicted RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 CTGFP29279 349 aa27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 CEP85Q6P2H3 762 aa27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 SH3RF3Q8TEJ3 882 aaPredicted RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 ZNF512BQ96KM6 892 aaPredicted RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 PARK7Q99497 189 aaKnown RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 TLR7Q9NYK1 1049 aaKnown RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 DBNLQ9UJU6 430 aaKnown RBP27.18■■□□□ 1.94
LYSMD4-208ENST00000493256 MYO5AQ9Y4I1 1855 aaKnown RBP27.17■■□□□ 1.94
LYSMD4-208ENST00000493256 NAA16Q6N069 864 aaPredicted RBP27.17■■□□□ 1.94
LYSMD4-208ENST00000493256 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.17■■□□□ 1.94
LYSMD4-208ENST00000493256 BRCA2P51587 3418 aa27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 GNRH1P01148 92 aa27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 CYP2C8P10632 490 aa27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 ZAP70P43403 619 aa27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 PRPF38BQ5VTL8 546 aaKnown RBP27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 FASTKD5Q7L8L6 764 aaKnown RBP27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 CCDC84Q86UT8 332 aaPredicted RBP27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 EAF2Q96CJ1 260 aaPredicted RBP27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 TRIM47Q96LD4 638 aa27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 NOL10Q9BSC4 688 aaKnown RBP27.16■■□□□ 1.94
LYSMD4-208ENST00000493256 MKI67P46013 3256 aaKnown RBP27.15■■□□□ 1.94
LYSMD4-208ENST00000493256 PSMC4P43686 418 aa27.15■■□□□ 1.94
LYSMD4-208ENST00000493256 GADL1Q6ZQY3 521 aa27.15■■□□□ 1.94
LYSMD4-208ENST00000493256 NBPF11Q86T75 865 aa27.15■■□□□ 1.94
LYSMD4-208ENST00000493256 CCDC8Q9H0W5 538 aaPredicted RBP27.15■■□□□ 1.94
LYSMD4-208ENST00000493256 AATFQ9NY61 560 aaKnown RBP eCLIP27.15■■□□□ 1.94
LYSMD4-208ENST00000493256 TRIM75PA6NK02 468 aa27.14■■□□□ 1.94
LYSMD4-208ENST00000493256 EN2P19622 333 aaPredicted RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms