RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PDS5AQ29RF7 1337 aaKnown RBP18.01■□□□□ 0.47
SS18L1-205ENST00000492466 ZSWIM8A7E2V4 1837 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 PHF20L1A8MW92 1017 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 HSP90AB4PQ58FF6 505 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 NOL9Q5SY16 702 aaKnown RBP18.01■□□□□ 0.47
SS18L1-205ENST00000492466 SH3BP5LQ7L8J4 393 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 ERC1Q8IUD2 1116 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 ZNF384Q8TF68 577 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 FAM163AQ96GL9 167 aaPredicted RBP18.01■□□□□ 0.47
SS18L1-205ENST00000492466 XAGE2Q96GT9 111 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 IDI2Q9BXS1 227 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 ARHGAP39Q9C0H5 1083 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 MYH2Q9UKX2 1941 aa18.01■□□□□ 0.47
SS18L1-205ENST00000492466 APBB1O00213 710 aa18■□□□□ 0.47
SS18L1-205ENST00000492466 MAP3K10Q02779 954 aa18■□□□□ 0.47
SS18L1-205ENST00000492466 C17orf99Q6UX52 265 aa18■□□□□ 0.47
SS18L1-205ENST00000492466 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
SS18L1-205ENST00000492466 ZNF333Q96JL9 665 aa18■□□□□ 0.47
SS18L1-205ENST00000492466 EXOC6BQ9Y2D4 811 aa18■□□□□ 0.47
SS18L1-205ENST00000492466 PTCH2Q9Y6C5 1203 aa18■□□□□ 0.47
SS18L1-205ENST00000492466 ADGRA2Q96PE1 1338 aa17.99■□□□□ 0.47
SS18L1-205ENST00000492466 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
SS18L1-205ENST00000492466 CTGFP29279 349 aa17.99■□□□□ 0.47
SS18L1-205ENST00000492466 RGS3P49796 1198 aa17.99■□□□□ 0.47
SS18L1-205ENST00000492466 LACTBP83111 547 aaPredicted RBP17.99■□□□□ 0.47
SS18L1-205ENST00000492466 ZGPATQ8N5A5 531 aaKnown RBP17.99■□□□□ 0.47
SS18L1-205ENST00000492466 AK9Q5TCS8 1911 aa17.99■□□□□ 0.47
SS18L1-205ENST00000492466 ENTPD3O75355 529 aa17.98■□□□□ 0.47
SS18L1-205ENST00000492466 WDHD1O75717 1129 aaPredicted RBP17.98■□□□□ 0.47
SS18L1-205ENST00000492466 EN2P19622 333 aaPredicted RBP17.98■□□□□ 0.47
SS18L1-205ENST00000492466 ANKRD23Q86SG2 305 aa17.98■□□□□ 0.47
SS18L1-205ENST00000492466 DDX4Q9NQI0 724 aaKnown RBP17.98■□□□□ 0.47
SS18L1-205ENST00000492466 DDTLA6NHG4 134 aaPredicted RBP17.97■□□□□ 0.47
SS18L1-205ENST00000492466 RHBDL3P58872 404 aa17.97■□□□□ 0.47
SS18L1-205ENST00000492466 TNNI3KQ59H18 835 aa17.97■□□□□ 0.47
SS18L1-205ENST00000492466 TTC39AQ5SRH9 613 aa17.97■□□□□ 0.47
SS18L1-205ENST00000492466 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
SS18L1-205ENST00000492466 ABCF2Q9UG63 623 aa17.97■□□□□ 0.47
SS18L1-205ENST00000492466 FPGT-TNNI3KV9GXZ4 949 aa17.97■□□□□ 0.47
SS18L1-205ENST00000492466 MAST2Q6P0Q8 1798 aa17.96■□□□□ 0.47
SS18L1-205ENST00000492466 PDHXO00330 501 aa17.96■□□□□ 0.47
SS18L1-205ENST00000492466 MECOMQ03112 1051 aa17.96■□□□□ 0.47
SS18L1-205ENST00000492466 ARHGEF6Q15052 776 aa17.96■□□□□ 0.47
SS18L1-205ENST00000492466 HMG20BQ9P0W2 317 aa17.96■□□□□ 0.47
SS18L1-205ENST00000492466 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
SS18L1-205ENST00000492466 DOCK2Q92608 1830 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 GPR75-ASB3A0A0A6YYF3 556 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 BTDP43251 543 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 SLC9C1Q4G0N8 1177 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 CCDC158Q5M9N0 1113 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 PI16Q6UXB8 463 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 DZIP1Q86YF9 867 aaKnown RBP17.95■□□□□ 0.46
SS18L1-205ENST00000492466 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 GPR108Q9NPR9 543 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 CPA4Q9UI42 421 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 MROH7-TTC4A0A0A0MT08 1334 aa17.95■□□□□ 0.46
SS18L1-205ENST00000492466 CXCL11O14625 94 aa17.94■□□□□ 0.46
SS18L1-205ENST00000492466 UQCRFS1P1P0C7P4 283 aa17.94■□□□□ 0.46
SS18L1-205ENST00000492466 PTPRAP18433 802 aa17.94■□□□□ 0.46
SS18L1-205ENST00000492466 SPTY2D1Q68D10 685 aaPredicted RBP17.94■□□□□ 0.46
SS18L1-205ENST00000492466 AACSQ86V21 672 aa17.94■□□□□ 0.46
SS18L1-205ENST00000492466 SCYL3Q8IZE3 742 aa17.94■□□□□ 0.46
SS18L1-205ENST00000492466 RANBP2P49792 3224 aaKnown RBP17.94■□□□□ 0.46
SS18L1-205ENST00000492466 GNRH1P01148 92 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 ARID4AP29374 1257 aaPredicted RBP17.93■□□□□ 0.46
SS18L1-205ENST00000492466 TBC1D9Q6ZT07 1266 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 NBPF11Q86T75 865 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 SLF2Q8IX21 1173 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 SPATA5Q8NB90 893 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 SH3TC2Q8TF17 1288 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
SS18L1-205ENST00000492466 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 TRIM47Q96LD4 638 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 DBNDD2Q9BQY9 259 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 IL1RAPL2Q9NP60 686 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 AFG3L2Q9Y4W6 797 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 ZHX2Q9Y6X8 837 aa17.93■□□□□ 0.46
SS18L1-205ENST00000492466 A0A0G2JLL6 359 aaPredicted RBP17.92■□□□□ 0.46
SS18L1-205ENST00000492466 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
SS18L1-205ENST00000492466 BCRP11274 1271 aa17.92■□□□□ 0.46
SS18L1-205ENST00000492466 KIF22Q14807 665 aa17.92■□□□□ 0.46
SS18L1-205ENST00000492466 PRRT2Q7Z6L0 340 aaPredicted RBP17.92■□□□□ 0.46
SS18L1-205ENST00000492466 CLASRPQ8N2M8 674 aaKnown RBP17.92■□□□□ 0.46
SS18L1-205ENST00000492466 RHPN1Q8TCX5 695 aa17.92■□□□□ 0.46
SS18L1-205ENST00000492466 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
SS18L1-205ENST00000492466 PHIPQ8WWQ0 1821 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 ECM2O94769 699 aaPredicted RBP17.91■□□□□ 0.46
SS18L1-205ENST00000492466 IFIT2P09913 472 aaKnown RBP17.91■□□□□ 0.46
SS18L1-205ENST00000492466 CYP2C8P10632 490 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 MCAMP43121 646 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 PSMC4P43686 418 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 PRMT2P55345 433 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 PICALMQ13492 652 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 ZSCAN29Q8IWY8 852 aaPredicted RBP17.91■□□□□ 0.46
SS18L1-205ENST00000492466 TMEM106CQ9BVX2 250 aa17.91■□□□□ 0.46
SS18L1-205ENST00000492466 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
SS18L1-205ENST00000492466 PTPRFP10586 1907 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms