RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 SCUBE3Q8IX30 993 aa12.67□□□□□ -0.38
EPHB4-208ENST00000492403 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
EPHB4-208ENST00000492403 THAP11Q96EK4 314 aa12.67□□□□□ -0.38
EPHB4-208ENST00000492403 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
EPHB4-208ENST00000492403 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
EPHB4-208ENST00000492403 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.67□□□□□ -0.38
EPHB4-208ENST00000492403 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
EPHB4-208ENST00000492403 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
EPHB4-208ENST00000492403 CEP350Q5VT06 3117 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 ABCC4O15439 1325 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
EPHB4-208ENST00000492403 NR1I2O75469 434 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 HSPA1AP0DMV8 641 aaKnown RBP12.66□□□□□ -0.38
EPHB4-208ENST00000492403 HSPA1BP0DMV9 641 aaKnown RBP12.66□□□□□ -0.38
EPHB4-208ENST00000492403 GRAPQ13588 217 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 KRT24Q2M2I5 525 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 ZBTB33Q86T24 672 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 GRAPLQ8TC17 118 aaPredicted RBP12.66□□□□□ -0.38
EPHB4-208ENST00000492403 DRC1Q96MC2 740 aa12.66□□□□□ -0.38
EPHB4-208ENST00000492403 VAMP4O75379 141 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 CCDC30Q5VVM6 783 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 MAP1SQ66K74 1059 aaPredicted RBP12.65□□□□□ -0.38
EPHB4-208ENST00000492403 CCDC102BQ68D86 513 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 USP50Q70EL3 339 aaPredicted RBP12.65□□□□□ -0.38
EPHB4-208ENST00000492403 FAM177A1Q8N128 213 aaPredicted RBP12.65□□□□□ -0.38
EPHB4-208ENST00000492403 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
EPHB4-208ENST00000492403 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 ASB16Q96NS5 453 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
EPHB4-208ENST00000492403 SFI1A8K8P3 1242 aa12.64□□□□□ -0.39
EPHB4-208ENST00000492403 TRIM27P14373 513 aa12.64□□□□□ -0.39
EPHB4-208ENST00000492403 CDK11BP21127 795 aaKnown RBP12.64□□□□□ -0.39
EPHB4-208ENST00000492403 TAGLNQ01995 201 aaKnown RBP12.64□□□□□ -0.39
EPHB4-208ENST00000492403 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
EPHB4-208ENST00000492403 DEFB115Q30KQ5 88 aa12.64□□□□□ -0.39
EPHB4-208ENST00000492403 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
EPHB4-208ENST00000492403 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
EPHB4-208ENST00000492403 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
EPHB4-208ENST00000492403 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
EPHB4-208ENST00000492403 EYA3Q99504 573 aa12.64□□□□□ -0.39
EPHB4-208ENST00000492403 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
EPHB4-208ENST00000492403 H7C1D1 291 aa12.63□□□□□ -0.39
EPHB4-208ENST00000492403 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
EPHB4-208ENST00000492403 LRP10Q7Z4F1 713 aa12.63□□□□□ -0.39
EPHB4-208ENST00000492403 GTF3C2Q8WUA4 911 aaPredicted RBP12.63□□□□□ -0.39
EPHB4-208ENST00000492403 UPF2Q9HAU5 1272 aaKnown RBP12.63□□□□□ -0.39
EPHB4-208ENST00000492403 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
EPHB4-208ENST00000492403 PTPRCP08575 1304 aa12.62□□□□□ -0.39
EPHB4-208ENST00000492403 POTEB2H3BUK9 544 aa12.62□□□□□ -0.39
EPHB4-208ENST00000492403 IRS4O14654 1257 aaPredicted RBP12.62□□□□□ -0.39
EPHB4-208ENST00000492403 EPS15P42566 896 aa12.62□□□□□ -0.39
EPHB4-208ENST00000492403 GRM1Q13255 1194 aa12.62□□□□□ -0.39
EPHB4-208ENST00000492403 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
EPHB4-208ENST00000492403 MYD88Q99836 296 aa12.62□□□□□ -0.39
EPHB4-208ENST00000492403 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
EPHB4-208ENST00000492403 CNTNAP1P78357 1384 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 BHMG1C9JSJ3 638 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-208ENST00000492403 RAD17O75943 681 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-208ENST00000492403 RECKO95980 971 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 PBX2P40425 430 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 ECE1P42892 770 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 KIAA2012Q0VF49 1180 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-208ENST00000492403 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 ISCA1Q9BUE6 129 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-208ENST00000492403 ZC3H12CQ9C0D7 883 aaKnown RBP12.61□□□□□ -0.39
EPHB4-208ENST00000492403 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 LAMB2P55268 1798 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
EPHB4-208ENST00000492403 DXOO77932 396 aaKnown RBP12.6□□□□□ -0.39
EPHB4-208ENST00000492403 GMPSP49915 693 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-208ENST00000492403 CXCL9Q07325 125 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
EPHB4-208ENST00000492403 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-208ENST00000492403 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
EPHB4-208ENST00000492403 MKNK1Q9BUB5 465 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-208ENST00000492403 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
EPHB4-208ENST00000492403 LGR5O75473 907 aa12.59□□□□□ -0.39
EPHB4-208ENST00000492403 RLBP1P12271 317 aa12.59□□□□□ -0.39
EPHB4-208ENST00000492403 SCNN1DP51172 638 aa12.59□□□□□ -0.39
EPHB4-208ENST00000492403 RPS8P62241 208 aaKnown RBP12.59□□□□□ -0.39
EPHB4-208ENST00000492403 MAP2K1Q02750 393 aaPredicted RBP12.59□□□□□ -0.39
EPHB4-208ENST00000492403 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
EPHB4-208ENST00000492403 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
EPHB4-208ENST00000492403 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 520.2 ms