RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 GAKO14976 1311 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 PDE4DIPQ5VU43 2346 aa18.39■□□□□ 0.53
CDC42SE1-205ENST00000491825 CETPP11597 493 aa18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 TIMM10P62072 90 aa18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 TCP10Q12799 353 aa18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 LRRCC1Q9C099 1032 aa18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZFYVE28Q9HCC9 887 aa18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZCCHC17Q9NP64 241 aaKnown RBP18.38■□□□□ 0.53
CDC42SE1-205ENST00000491825 BTBD19C9JJ37 291 aa18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 NEFLP07196 543 aa18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 PPATQ06203 517 aa18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 SNAPC2Q13487 334 aa18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 ARMC5Q96C12 935 aa18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
CDC42SE1-205ENST00000491825 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
CDC42SE1-205ENST00000491825 IDI2Q9BXS1 227 aa18.36■□□□□ 0.53
CDC42SE1-205ENST00000491825 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
CDC42SE1-205ENST00000491825 DBNLQ9UJU6 430 aaKnown RBP18.36■□□□□ 0.53
CDC42SE1-205ENST00000491825 POTEFA5A3E0 1075 aa18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 TLR2O60603 784 aa18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 NOL9Q5SY16 702 aaKnown RBP18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 PRPF38BQ5VTL8 546 aaKnown RBP18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZGPATQ8N5A5 531 aaKnown RBP18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 IL1RAPL2Q9NP60 686 aa18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 KCNH4Q9UQ05 1017 aa18.35■□□□□ 0.53
CDC42SE1-205ENST00000491825 APBB1O00213 710 aa18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 MOGSQ13724 837 aa18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 AACSQ86V21 672 aa18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 FAM163AQ96GL9 167 aaPredicted RBP18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
CDC42SE1-205ENST00000491825 ENTPD3O75355 529 aa18.33■□□□□ 0.52
CDC42SE1-205ENST00000491825 IGHDP01880 384 aa18.33■□□□□ 0.52
CDC42SE1-205ENST00000491825 ARID4AP29374 1257 aaPredicted RBP18.33■□□□□ 0.52
CDC42SE1-205ENST00000491825 RGS3P49796 1198 aa18.33■□□□□ 0.52
CDC42SE1-205ENST00000491825 SH3BP5LQ7L8J4 393 aa18.33■□□□□ 0.52
CDC42SE1-205ENST00000491825 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
CDC42SE1-205ENST00000491825 ADGRA2Q96PE1 1338 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 WDHD1O75717 1129 aaPredicted RBP18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 LACTBP83111 547 aaPredicted RBP18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 MAP3K10Q02779 954 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 ANKRD23Q86SG2 305 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 ZNF333Q96JL9 665 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 ARHGAP39Q9C0H5 1083 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 ABCF2Q9UG63 623 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
CDC42SE1-205ENST00000491825 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 CCDC158Q5M9N0 1113 aa18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 C17orf99Q6UX52 265 aa18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 DZIP1Q86YF9 867 aaKnown RBP18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
CDC42SE1-205ENST00000491825 RBBP6Q7Z6E9 1792 aaKnown RBP18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 IFIT2P09913 472 aaKnown RBP18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 BTDP43251 543 aa18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 RHBDL3P58872 404 aa18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 MECOMQ03112 1051 aa18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 PI16Q6UXB8 463 aa18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
CDC42SE1-205ENST00000491825 GPR75-ASB3A0A0A6YYF3 556 aa18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 SMARCA5O60264 1052 aaPredicted RBP18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 SLURP2P0DP57 97 aa18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 CTGFP29279 349 aa18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 SLF2Q8IX21 1173 aa18.29■□□□□ 0.52
CDC42SE1-205ENST00000491825 PDHXO00330 501 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 CXCL11O14625 94 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 GPAT2Q6NUI2 795 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 SCYL3Q8IZE3 742 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 SPATA5Q8NB90 893 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 ZSWIM8A7E2V4 1837 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 DOCK2Q92608 1830 aa18.28■□□□□ 0.52
CDC42SE1-205ENST00000491825 MAST2Q6P0Q8 1798 aa18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 MCAMP43121 646 aa18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 SLC9C1Q4G0N8 1177 aa18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 NSUN4Q96CB9 384 aaKnown RBP18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 CPA4Q9UI42 421 aa18.27■□□□□ 0.52
CDC42SE1-205ENST00000491825 MYH2Q9UKX2 1941 aa18.26■□□□□ 0.51
CDC42SE1-205ENST00000491825 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE1-205ENST00000491825 GNRH1P01148 92 aa18.26■□□□□ 0.51
CDC42SE1-205ENST00000491825 PTPRAP18433 802 aa18.26■□□□□ 0.51
CDC42SE1-205ENST00000491825 EN2P19622 333 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms