RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CCDC102B	Q68D86	513 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	MFSD6	Q6ZSS7	791 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	CEP57L1	Q8IYX8	460 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	VGLL2	Q8N8G2	317 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	MRPS27	Q92552	414 aa	Known RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	OSBP2	Q969R2	916 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	BPIFA3	Q9BQP9	254 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	FUCA2	Q9BTY2	467 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	NAPB	Q9H115	298 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	ZNF287	Q9HBT7	754 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	BSDC1	Q9NW68	430 aa	Predicted RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	DACT1	Q9NYF0	836 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	KIAA1468	Q9P260	1216 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	DACH1	Q9UI36	760 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	DENND2A	Q9ULE3	1009 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	COL22A1	Q8NFW1	1626 aa	Predicted RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	SALL1	Q9NSC2	1324 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ZBTB43	O43298	467 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	IDH1	O75874	414 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	LARGE1	O95461	756 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ADCY5	O95622	1261 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	CPA1	P15085	419 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	CMA1	P23946	247 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	IARS	P41252	1262 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ZAP70	P43403	619 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ME1	P48163	572 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ZNF165	P49910	485 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	METAP2	P50579	478 aa	Known RBP eCLIP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	AKAP17A	Q02040	695 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	TYRO3	Q06418	890 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SSRP1	Q08945	709 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	STK3	Q13188	491 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	STK38	Q15208	465 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SF3B3	Q15393	1217 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SARM1	Q6SZW1	724 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	CDC37L1	Q7L3B6	337 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	TTC6	Q86TZ1	520 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	VPS37D	Q86XT2	251 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ANKRD18A	Q8IVF6	992 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	AMOTL1	Q8IY63	956 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	MB21D2	Q8IYB1	491 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	PIBF1	Q8WXW3	757 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ESR2	Q92731	530 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SYTL4	Q96C24	671 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	STRBP	Q96SI9	672 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SDF4	Q9BRK5	362 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	GTPBP4	Q9BZE4	634 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	GREM2	Q9H772	168 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	BRMS1	Q9HCU9	246 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	RBM28	Q9NW13	759 aa	Known RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	IMPACT	Q9P2X3	320 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	ORC3	Q9UBD5	711 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SEPT9	Q9UHD8	586 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.35	□□□□□ -1.23
FN1-223	ENST00000490833	SLC12A7	Q9Y666	1083 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	STRC	Q7RTU9	1775 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	PLCH1	Q4KWH8	1693 aa		7.35	□□□□□ -1.23
FN1-223	ENST00000490833	XIRP1	Q702N8	1843 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	SPATA31A5	Q5VU36	1347 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	SPATA31A7	Q8IWB4	1347 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	KLF18	A0A0U1RQI7	1052 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	GOLGA8B	A8MQT2	603 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	DYNC1I1	O14576	645 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	SPTLC2	O15270	562 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	RRP9	O43818	475 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	GFRA3	O60609	400 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	PDE6A	P16499	860 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	MCAM	P43121	646 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	CRKL	P46109	303 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	PIP4K2A	P48426	406 aa	Predicted RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	APOBR	Q0VD83	1088 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	RILPL1	Q5EBL4	403 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	AKNAD1	Q5T1N1	836 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	TPTE2	Q6XPS3	522 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	NFXL1	Q6ZNB6	911 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	LAPTM4B	Q86VI4	370 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	IQCA1	Q86XH1	822 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	CCAR1	Q8IX12	1150 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	TDRD7	Q8NHU6	1098 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	STAG1	Q8WVM7	1258 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	JARID2	Q92833	1246 aa	Predicted RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	MRFAP1L1	Q96HT8	127 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	ZNF594	Q96JF6	807 aa	Predicted RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	ZFR	Q96KR1	1074 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	NLRP3	Q96P20	1036 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	SEC62	Q99442	399 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	EPAS1	Q99814	870 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	PUS3	Q9BZE2	481 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	GDPD2	Q9HCC8	539 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	RTN4	Q9NQC3	1192 aa	Known RBP	7.34	□□□□□ -1.23
FN1-223	ENST00000490833	LRP2BP	Q9P2M1	347 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	ANAPC4	Q9UJX5	808 aa		7.34	□□□□□ -1.23
FN1-223	ENST00000490833	NID2	Q14112	1375 aa		7.33	□□□□□ -1.24
FN1-223	ENST00000490833	GLI3	P10071	1580 aa		7.33	□□□□□ -1.24
FN1-223	ENST00000490833	CNTNAP4	Q9C0A0	1308 aa		7.33	□□□□□ -1.24
FN1-223	ENST00000490833	ZNF532	Q9HCE3	1301 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms