RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 HHIPQ96QV1 700 aa4.76□□□□□ -1.65
CRNKL1-203ENST00000490258 RASSF4Q9H2L5 321 aa4.76□□□□□ -1.65
CRNKL1-203ENST00000490258 FAM13BQ9NYF5 915 aa4.76□□□□□ -1.65
CRNKL1-203ENST00000490258 MADDQ8WXG6 1647 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 PZPP20742 1482 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 IFT172Q9UG01 1749 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 NAIPQ13075 1403 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 PSPNO60542 156 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 FKBP4Q02790 459 aaKnown RBP eCLIP4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 SF3B2Q13435 895 aaKnown RBP4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 PEAR1Q5VY43 1037 aaPredicted RBP4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 TMEM40Q8WWA1 233 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 OSBPL1AQ9BXW6 950 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 PBX4Q9BYU1 374 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 ADAM19Q9H013 955 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 KANSL3Q9P2N6 904 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 PREX1Q8TCU6 1659 aa4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 RNF17Q9BXT8 1623 aaKnown RBP4.75□□□□□ -1.65
CRNKL1-203ENST00000490258 C3P01024 1663 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 CD109Q6YHK3 1445 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 POGZQ7Z3K3 1410 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 TNFRSF21O75509 655 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 F13BP05160 661 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 ZSCAN22P10073 491 aaPredicted RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 DNM1Q05193 864 aaKnown RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 MESP2Q0VG99 397 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 HYAL2Q12891 473 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 GDF6Q6KF10 455 aaPredicted RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 LRRC56Q8IYG6 542 aaPredicted RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 FAM168AQ92567 244 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 FAM129BQ96TA1 746 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 POP1Q99575 1024 aaKnown RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 ANO2Q9NQ90 1003 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 DZANK1Q9NVP4 752 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 KCNK4Q9NYG8 393 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 FOXD3Q9UJU5 478 aaPredicted RBP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 ADGRL2O95490 1459 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 PLEKHH2Q8IVE3 1493 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 SHANK2Q9UPX8 1470 aa4.74□□□□□ -1.65
CRNKL1-203ENST00000490258 TET3O43151 1660 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 PLCH2O75038 1416 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 AKNAQ7Z591 1439 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 SCAPERQ9BY12 1400 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 SETD5Q9C0A6 1442 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 EIF2AK4Q9P2K8 1649 aaKnown RBP4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 ADAM11O75078 769 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 NEFLP07196 543 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 EPHA1P21709 976 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 ARID4AP29374 1257 aaPredicted RBP4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 RAP1GAPP47736 663 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 ZNF438Q7Z4V0 828 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 FBXL6Q8N531 539 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 SOX13Q9UN79 622 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 FNDC3AQ9Y2H6 1198 aaKnown RBP4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 SYNMO15061 1565 aa4.73□□□□□ -1.65
CRNKL1-203ENST00000490258 ZMYM4Q5VZL5 1548 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 FAM135AQ9P2D6 1515 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 BCORL1Q5H9F3 1711 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 KIF1BO60333 1816 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 PLEKHD1A6NEE1 506 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 EREGO14944 169 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 SART1O43290 800 aaKnown RBP4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 TRPA1O75762 1119 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 FAM13AO94988 1023 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 RAPGEF3O95398 923 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 GHRHP01286 108 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 CD68P34810 354 aaPredicted RBP4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 KIAA1211Q6ZU35 1233 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 FBXO41Q8TF61 875 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 ZKSCAN3Q9BRR0 538 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 NRSN2Q9GZP1 204 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 MUC3BQ9H195 1237 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 LATS2Q9NRM7 1088 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 CFDP1Q9UEE9 299 aaPredicted RBP4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 GNEQ9Y223 722 aaKnown RBP4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 HIF3AQ9Y2N7 669 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 KIF15Q9NS87 1388 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 IQGAP1P46940 1657 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 PRDM15P57071 1507 aaPredicted RBP4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 ARAP3Q8WWN8 1544 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 MIA2Q96PC5 1412 aa4.72□□□□□ -1.65
CRNKL1-203ENST00000490258 PPLO60437 1756 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 H3BRB1 525 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 GPR182O15218 404 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 RPLP1P05386 114 aaKnown RBP4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 TTC39BQ5VTQ0 682 aaPredicted RBP4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 HGSNATQ68CP4 663 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 ALKBH2Q6NS38 261 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 DBX2Q6ZNG2 339 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 VN1R5Q7Z5H4 357 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 ATG4DQ86TL0 474 aaPredicted RBP4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 CACTIN-AS1Q8N1I8 211 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 AFAP1Q8N556 730 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 TMEM102Q8N9M5 508 aaPredicted RBP4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 SNX29Q8TEQ0 813 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 FOXD4L4Q8WXT5 416 aaPredicted RBP4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 BHLHE41Q9C0J9 482 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms