RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 HCLS1P14317 486 aaPredicted RBP5.87□□□□□ -1.47
CD46-215ENST00000488596 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
CD46-215ENST00000488596 ADAMTS6Q9UKP5 1117 aa5.87□□□□□ -1.47
CD46-215ENST00000488596 IVNS1ABPQ9Y6Y0 642 aa5.87□□□□□ -1.47
CD46-215ENST00000488596 RNGTTO60942 597 aaKnown RBP5.86□□□□□ -1.47
CD46-215ENST00000488596 RNASE1P07998 156 aaKnown RBP5.86□□□□□ -1.47
CD46-215ENST00000488596 KCNA1Q09470 495 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 ZNF648Q5T619 568 aaPredicted RBP5.86□□□□□ -1.47
CD46-215ENST00000488596 B4GALNT3Q6L9W6 998 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 PDZD3Q86UT5 571 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 TXNDC2Q86VQ3 553 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 TMC1Q8TDI8 760 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 STK35Q8TDR2 534 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 CITED4Q96RK1 184 aa5.86□□□□□ -1.47
CD46-215ENST00000488596 MBNL3Q9NUK0 354 aaKnown RBP5.86□□□□□ -1.47
CD46-215ENST00000488596 FUT4P22083 530 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 OXCT1P55809 520 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 PKN1Q16512 942 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 PI16Q6UXB8 463 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 CSRNP1Q96S65 589 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 DUSP23Q9BVJ7 150 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 KRT82Q9NSB4 513 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 PODXL2Q9NZ53 605 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 VAV3Q9UKW4 847 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 PLAGL2Q9UPG8 496 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 TRAK1Q9UPV9 953 aa5.85□□□□□ -1.47
CD46-215ENST00000488596 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 BIN1O00499 593 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 FARP2O94887 1054 aaPredicted RBP5.84□□□□□ -1.47
CD46-215ENST00000488596 NEFMP07197 916 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 FCGRTP55899 365 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 PRKCQQ04759 706 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 DTHD1Q6ZMT9 781 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 ATG4DQ86TL0 474 aaPredicted RBP5.84□□□□□ -1.47
CD46-215ENST00000488596 KCNB2Q92953 911 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 RC3H2Q9HBD1 1191 aaKnown RBP5.84□□□□□ -1.47
CD46-215ENST00000488596 TMEM39AQ9NV64 488 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 PCOLCE2Q9UKZ9 415 aa5.84□□□□□ -1.47
CD46-215ENST00000488596 ZNF124Q15973 351 aa5.83□□□□□ -1.48
CD46-215ENST00000488596 IFI16Q16666 785 aaKnown RBP5.83□□□□□ -1.48
CD46-215ENST00000488596 AOC3Q16853 763 aa5.83□□□□□ -1.48
CD46-215ENST00000488596 LRRN4CLQ8ND94 238 aa5.83□□□□□ -1.48
CD46-215ENST00000488596 ISL2Q96A47 359 aa5.83□□□□□ -1.48
CD46-215ENST00000488596 ALKBH8Q96BT7 664 aaKnown RBP5.83□□□□□ -1.48
CD46-215ENST00000488596 MKNK2Q9HBH9 465 aa5.83□□□□□ -1.48
CD46-215ENST00000488596 GPN3Q9UHW5 284 aaPredicted RBP5.83□□□□□ -1.48
CD46-215ENST00000488596 CEACAM5P06731 702 aa5.82□□□□□ -1.48
CD46-215ENST00000488596 ZC3H12AQ5D1E8 599 aaKnown RBP5.82□□□□□ -1.48
CD46-215ENST00000488596 PI4K2BQ8TCG2 481 aa5.82□□□□□ -1.48
CD46-215ENST00000488596 FAM168AQ92567 244 aa5.82□□□□□ -1.48
CD46-215ENST00000488596 HEXIM2Q96MH2 286 aaKnown RBP5.82□□□□□ -1.48
CD46-215ENST00000488596 RBCK1Q9BYM8 510 aa5.82□□□□□ -1.48
CD46-215ENST00000488596 GNEQ9Y223 722 aaKnown RBP5.82□□□□□ -1.48
CD46-215ENST00000488596 PATL2C9JE40 543 aaKnown RBP5.81□□□□□ -1.48
CD46-215ENST00000488596 PPP2R3AQ06190 1150 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 MAP1SQ66K74 1059 aaPredicted RBP5.81□□□□□ -1.48
CD46-215ENST00000488596 MPRIPQ6WCQ1 1025 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 FAM214BQ7L5A3 538 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 SULF2Q8IWU5 870 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 TOP6BLQ8N6T0 577 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 HRASLS5Q96KN8 279 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 DMRTB1Q96MA1 342 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 BCO2Q9BYV7 579 aa5.81□□□□□ -1.48
CD46-215ENST00000488596 ITIH2P19823 946 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 ARNTP27540 789 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 ARHGAP27Q6ZUM4 889 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.8□□□□□ -1.48
CD46-215ENST00000488596 RNF214Q8ND24 703 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 GPBAR1Q8TDU6 330 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 SSU72Q9NP77 194 aaKnown RBP5.8□□□□□ -1.48
CD46-215ENST00000488596 PRDM7Q9NQW5 492 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 NLRP2Q9NX02 1062 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 AKAP2Q9Y2D5 859 aa5.8□□□□□ -1.48
CD46-215ENST00000488596 TMEM265A0A087WTH1 108 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 ERVK-24P63145 666 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 ZNF252P-AS1Q0IIN9 211 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 NXPE4Q6UWF7 544 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 TMC7Q7Z402 723 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 KSR1Q8IVT5 923 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 TMEM40Q8WWA1 233 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 TNKS2Q9H2K2 1166 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 PPP4R2Q9NY27 417 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 CSADQ9Y600 493 aa5.79□□□□□ -1.48
CD46-215ENST00000488596 SOWAHDA6NJG2 315 aa5.78□□□□□ -1.48
CD46-215ENST00000488596 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
CD46-215ENST00000488596 NME2P22392 152 aa5.78□□□□□ -1.48
CD46-215ENST00000488596 HNRNPUQ00839 825 aaKnown RBP eCLIP5.78□□□□□ -1.48
CD46-215ENST00000488596 PPM1JQ5JR12 505 aa5.78□□□□□ -1.48
CD46-215ENST00000488596 UBE3DQ7Z6J8 389 aa5.78□□□□□ -1.48
CD46-215ENST00000488596 BHLHE22Q8NFJ8 381 aaPredicted RBP5.78□□□□□ -1.48
CD46-215ENST00000488596 GRIN3AQ8TCU5 1115 aa5.78□□□□□ -1.48
CD46-215ENST00000488596 CACNA2D2Q9NY47 1150 aa5.78□□□□□ -1.48
CD46-215ENST00000488596 NTF4P34130 210 aa5.77□□□□□ -1.49
CD46-215ENST00000488596 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.77□□□□□ -1.49
CD46-215ENST00000488596 ANGEL2Q5VTE6 544 aaKnown RBP5.77□□□□□ -1.49
CD46-215ENST00000488596 SLC23A3Q6PIS1 610 aa5.77□□□□□ -1.49
CD46-215ENST00000488596 SLC38A3Q99624 504 aa5.77□□□□□ -1.49
CD46-215ENST00000488596 CBX8Q9HC52 389 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms