RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 GTF2E1P29083 439 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-218ENST00000487565 ST5P78524 1137 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-218ENST00000487565 DDR1Q08345 913 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 FOXD4L5Q5VV16 416 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-218ENST00000487565 CYP2U1Q7Z449 544 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 JARID2Q92833 1246 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-218ENST00000487565 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 SUCLG2Q96I99 432 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 RIC1Q4ADV7 1423 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
GARNL3-218ENST00000487565 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-218ENST00000487565 CASP7P55210 303 aa9.53□□□□□ -0.88
GARNL3-218ENST00000487565 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
GARNL3-218ENST00000487565 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-218ENST00000487565 BICC1Q9H694 974 aaKnown RBP9.53□□□□□ -0.88
GARNL3-218ENST00000487565 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
GARNL3-218ENST00000487565 TNRC6CQ9HCJ0 1690 aaKnown RBP9.52□□□□□ -0.89
GARNL3-218ENST00000487565 HMMRO75330 724 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 SERPINB2P05120 415 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 CTSWP56202 376 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 PRR5LQ6MZQ0 368 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 CEP85Q6P2H3 762 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 ANKRD44Q8N8A2 993 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 PDGFDQ9GZP0 370 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-218ENST00000487565 MTFR1LQ9H019 292 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 PPP4R2Q9NY27 417 aa9.52□□□□□ -0.89
GARNL3-218ENST00000487565 DDX60Q8IY21 1712 aaKnown RBP9.51□□□□□ -0.89
GARNL3-218ENST00000487565 NRXN2Q9P2S2 1712 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 C10orf71Q711Q0 1435 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 PDE8AO60658 829 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 ZBTB7AO95365 584 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 MYCP01106 439 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-218ENST00000487565 VSIG8P0DPA2 414 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 HCLS1P14317 486 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-218ENST00000487565 POLD1P28340 1107 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 TM4SF1P30408 202 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 LYSMD3Q7Z3D4 306 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 CCDC155Q8N6L0 562 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 CCDC136Q96JN2 1154 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 PLA2G12BQ9BX93 195 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 LRP5O75197 1615 aa9.51□□□□□ -0.89
GARNL3-218ENST00000487565 SRGAP3O43295 1099 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 RNF144AP50876 292 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-218ENST00000487565 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 MTX1Q13505 466 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-218ENST00000487565 EPHA10Q5JZY3 1008 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 RPAP2Q8IXW5 612 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-218ENST00000487565 SYNE4Q8N205 404 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
GARNL3-218ENST00000487565 SLC35F4A4IF30 521 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 RAD21O60216 631 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 TRAK2O60296 914 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 FOXO4P98177 505 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-218ENST00000487565 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 RWDD1Q9H446 243 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-218ENST00000487565 ARHGEF10LQ9HCE6 1279 aa9.49□□□□□ -0.89
GARNL3-218ENST00000487565 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 SOX11P35716 441 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 ATP8B2P98198 1209 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 TAF7LQ5H9L4 462 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
GARNL3-218ENST00000487565 ANKRD18BA2A2Z9 1011 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 RHOQP17081 205 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 GPC1P35052 558 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 CLN3Q13286 438 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 IFIT5Q13325 482 aaKnown RBP9.47□□□□□ -0.89
GARNL3-218ENST00000487565 OS9Q13438 667 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-218ENST00000487565 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 CENPQQ7L2Z9 268 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-218ENST00000487565 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 SSH3Q8TE77 659 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
GARNL3-218ENST00000487565 BRIP1Q9BX63 1249 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 GREM2Q9H772 168 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 RAB6BQ9NRW1 208 aa9.47□□□□□ -0.89
GARNL3-218ENST00000487565 COL11A2P13942 1736 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-218ENST00000487565 MYH3P11055 1940 aa9.46□□□□□ -0.89
GARNL3-218ENST00000487565 GNRH1P01148 92 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 CSF1RP07333 972 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms